Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02049 ATGGCAAGCTGGCAGCTAACTGGGATAGCCCTTTCCGAATTATTGAGCCACCATCCCACCTCAGAGCTCAAATTCATCGCCGAACAATTCTCCTCAGGTGGAGGGTGCTGTTGGCATCGACGTCTTTGTCCTCGTCGTCAAGCCAGTCTCCGTCGGCCCTGTCCTCGTCGTGAAGCCTCTTCTCCTCGATCCTATTCTCCTCTACGGTGCGCGAAGGTCTACTTGGATCTCTTGGCGTCGCCTTCGCAAACGATTGCTCGGTCTCGAAAGGTTGCTCGTCGTCCCTGTTTTCATCGGTCGCGAACAGTTGCTCGATCCTCTTCAAGCTTGTCCTCTCTCTCCGTGAATCTCTGCCCGGAGCCTCGCCGTCGCGAACTAATTCTCTTTCGATCTCACTCTGTCACTGCCGTCCCTCCGTCGTCGTGTCTTTGGGTTCACAGTGTTCCCATTCCCTTTTCCATTTCCGAACCGATCCAACACAGCATCGCAACTCTTCCTTTGATTTCATTTCAATTACTTCCCAAATCAACAGTACCCTCTGACACGCTAAATTCACAGTTTGGGCATCATGCAGTTGTTGCATCAAGAGCTAGGCTGTTCAAGGAGTACAAAGAGGTTCAACGAGAGAAATCGGCTGATCCTGATATTCAACTAGTTTGTGATGATTCTAACATTTTTAAATGGACGGCACTGATCAAGGGACCCTCGGAGACTCCTTTTGAGGGGGGTGTCTTCCAACTTGCATTTTCGGTTCCAGAGCAGTATCCTCTACAGCCCCCCCAAGTCAGGTTTCTGACTAAAATATTTCACCCAAACGTGCACTTCAAGACGGGGGAGATTTGTTTGGATATCTTGAAAAATGCTTGGAGCCCGGCTTGGACACTTCAGTCTGTATGTAGGGCTATAATTGCTTTGATGGCACATCCAGAACCCGACAGCCCACTGAATTGTGATTCAGGTAATCTTTTGCGCTCCGGTGATGTTAGAGGGTACCAATCAATGGCCAGAATGTACACCAGGCTTGCAGCAATGCCAAAGAAGGGCTGA 1047 0.4986 MASWQLTGIALSELLSHHPTSELKFIAEQFSSGGGCCWHRRLCPRRQASLRRPCPRREASSPRSYSPLRCAKVYLDLLASPSQTIARSRKVARRPCFHRSRTVARSSSSLSSLSVNLCPEPRRRELILFRSHSVTAVPPSSCLWVHSVPIPFSISEPIQHSIATLPLISFQLLPKSTVPSDTLNSQFGHHAVVASRARLFKEYKEVQREKSADPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFSVPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02049 348 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 269 285 IPR023313 -
Adu10g02049 348 SMART ubc_7 197 344 - -
Adu10g02049 348 SUPERFAMILY UBC-like 189 344 IPR016135 -
Adu10g02049 348 PANTHER BNAA09G04490D PROTEIN 181 348 - -
Adu10g02049 348 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 181 348 - -
Adu10g02049 348 CDD UBCc 198 339 IPR000608 -
Adu10g02049 348 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 194 344 IPR000608 -
Adu10g02049 348 Gene3D Ubiquitin Conjugating Enzyme 191 343 IPR016135 -
Adu10g02049 348 Pfam Ubiquitin-conjugating enzyme 198 338 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02049 Adu-Chr10 91378066 91386903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02049 198 306 Miscellaneous Gene Families AT3G17000 36.283 1.11e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02049 K10689 - ini:109190965 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02049 10 91378066 91386903 Adu10g02049 10 91378066 91386903 ECH