Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02012 ATGAGAACTTGTTCACACATGGTTTTTGCACCAAAGTGCTCCAGTCGTCCCAAACGACCTTTCATCTTCTCACGTGGCTTTGATCACTCCACTGCTGGATTCTCCACCATATTCAACCCAATGTTAATATCTTTGCAACAAATTACATTGCAAATCGATGCTTCCAAAGCCATGAAAAGCATCACAACTAAATTCCTTGATGCTGTTGTGGATTCAGTTTTCCAGTTTGTTGATGTACCACGCCTTCCATCTCAGAGTAACTTTGCTCCGGTAGAGGAGATAGGAGAGCCCATACTTATCACTGATATTGAAGGTGAAATACCAAAGGGATTTCCAGAAGGTGTCTACATAAGAAATGGATCAAACCCACTGTTTGGAGGGTTGAAATCAACAAAGTCAATTTTGGGGAGTTCAGATAGTGCTTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAAGCAAATTGATGAAAATGATGGGAATTACACTCTTGTGTACAACAACAAACATGTTGAAACTTCATCATATAGGCTTGAGAAACAAATTTCTGCTGATGGAAAAGAATTGGTTCATAAAGTGGATATAAAACTAGACAGATGCTGTCTTTGCCATGAGATAGGTATCACACAAAGATACATTGTGATATTGGATTATCCACTCATAATTGACCCAAACAGACTTCTTAGAAGAGGGCAAATATTAGAAGGAAAAATACGCGAGGATTGGGATTATGCCCATATATGGTGA 756 0.3902 MRTCSHMVFAPKCSSRPKRPFIFSRGFDHSTAGFSTIFNPMLISLQQITLQIDASKAMKSITTKFLDAVVDSVFQFVDVPRLPSQSNFAPVEEIGEPILITDIEGEIPKGFPEGVYIRNGSNPLFGGLKSTKSILGSSDSAWVEGEGMLHALYFKKQIDENDGNYTLVYNNKHVETSSYRLEKQISADGKELVHKVDIKLDRCCLCHEIGITQRYIVILDYPLIIDPNRLLRRGQILEGKIREDWDYAHIW 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02012 251 PANTHER BETA-CAROTENE DIOXYGENASE 35 184 IPR004294 GO:0016702
Adu10g02012 251 Pfam Retinal pigment epithelial membrane protein 89 184 IPR004294 GO:0016702
Adu10g02012 251 PANTHER BETA-CAROTENE DIOXYGENASE 185 238 IPR004294 GO:0016702
Adu10g02012 251 PANTHER OS06G0162550 PROTEIN 185 238 - -
Adu10g02012 251 PANTHER OS06G0162550 PROTEIN 35 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02012 Adu-Chr10 90343078 90358357 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02012 - - gmx:100817207 211.846