Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01996 ATGGCTTTCTCAGTCTTACCCTCCTCACCATCAATCAGAAGATCCATTTCATATCCAAGAAGCATGGTTGTTTCTAATAAAATGTCTGATAATAAAATTAATAATGTTGGAGAAGGGTTCCTTTCACCTCCAAACAAGGGCATCTACAAAAGCCGACGCTCCCTTCAAGACTTGACCGTTGCGAGTGTTGCGAGTCGTCTACCGCCTCCGTCAGTGGCGGAAGGGCACTGGCACCATAGCGCATGGACTAGTATCCGTCAAGAGAGATGGGAAGGGGAGCTGGTTGTCCAAGGAGAAATACCATTGTGGCTGAAAGGAACATACCTGAGGAATGGGCCAGGCATGTGGCACATTGGAGACTACAACTTCCGGCACCTCTTTGACGGTTACGCCACCCTCGTCAAGCTCCACTTCGAAGACGGCCGGTTAATCGCCGGCCACCGCCAACTGGAGTCACAAGCCTACCAAGCCGCCAAAAAGAACCAAAAGATCTGCTACCGCGAGTTCTCGGAGGTACCAAAGGCGGAGAACTTCCTGGCATACGTGGGAGAATTGGCGAGCCTGTTCTCCGGCGCATCCCTGACGGACAACGCCAACACCGGAGTGGTGAGGCTCGGCGACGGCAGGGTGGTGTGCCTGACGGAGACACAGAAGGGGTCTATCGTGATAGACCCCGAAACACTGGAGACTAAGGGAAAATTCTGCTACAGCGATTCTTTGGGGGGTTTGATTCACTCGGCGCATCCGATTGTGACGGAGGAGGAGTTCTTGACTCTGTTGCCGGATCTGGTGAAGCCTGGCTACGTGGTGGCAAGAATGGAGAAGGGAAGTAATGAGAGGAAGAATCTTCTTAAGGCTGAGCCTACCCCTTTGTACAAGTTCCGCTGGTACCCTCACAACAATGCTTACATGCATGTCATGTGCAAGGCCACTGGCAAGATTGTGGCAAGTGTGGAGGTGCCTCTGTTTGTTCAGTTCCATTTCATAAATGCATATGAAGAGAAAGATGAAGATGGAAGAGTTACGGCGATAATCGCCGACTGTTGTGAGCACAATGCAAATACCGACATTCTTGAGAAGCTCAGACTAAACAACCTTCGTTCCTATAATGGTGAAGATGTTCTACCCGACGCTAGGGTTGGTCGATTCCGAATACCTTTTGATGGGAGTCCATATGGAACCTTGGAGGCAGCATTAGATCCAAATGAACATGGGAGAGGCATGGACATGTGCACCATAAACCCTAATTATTTAGGAAAGAAATATAGATATGCTTATGCTTGTGGAGCACATCGCCCTTGTAACTTTCCCAACACCATCACCAAGATTGATTTTGAGTTGAAAAAGGCTAAGAACTGGTATGAAGAAGGTACTGTGCCCTCGGAACCATTCTTTGTAGCTCGGCCGGGTGCAATCGAAGAAGACGATGGCGTGGTAATCTCAGTAGTTAGTGAGAAAAATGGAGGAGCATATGCGTTGGTGTTAGATGGTTCCACTTTTCAAGAGATTGCTAGGGCCAAGTTCCCTTATGCAATTCCATATGGGTTGCATGGATGCTGGGTTCCAAAAAATTAG 1575 0.4895 MAFSVLPSSPSIRRSISYPRSMVVSNKMSDNKINNVGEGFLSPPNKGIYKSRRSLQDLTVASVASRLPPPSVAEGHWHHSAWTSIRQERWEGELVVQGEIPLWLKGTYLRNGPGMWHIGDYNFRHLFDGYATLVKLHFEDGRLIAGHRQLESQAYQAAKKNQKICYREFSEVPKAENFLAYVGELASLFSGASLTDNANTGVVRLGDGRVVCLTETQKGSIVIDPETLETKGKFCYSDSLGGLIHSAHPIVTEEEFLTLLPDLVKPGYVVARMEKGSNERKNLLKAEPTPLYKFRWYPHNNAYMHVMCKATGKIVASVEVPLFVQFHFINAYEEKDEDGRVTAIIADCCEHNANTDILEKLRLNNLRSYNGEDVLPDARVGRFRIPFDGSPYGTLEAALDPNEHGRGMDMCTINPNYLGKKYRYAYACGAHRPCNFPNTITKIDFELKKAKNWYEEGTVPSEPFFVARPGAIEEDDGVVISVVSEKNGGAYALVLDGSTFQEIARAKFPYAIPYGLHGCWVPKN 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01996 524 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 281 524 - -
Adu10g01996 524 PANTHER BETA-CAROTENE DIOXYGENASE 281 524 IPR004294 GO:0016702
Adu10g01996 524 PANTHER BETA-CAROTENE DIOXYGENASE 13 281 IPR004294 GO:0016702
Adu10g01996 524 Pfam Retinal pigment epithelial membrane protein 85 276 IPR004294 GO:0016702
Adu10g01996 524 Pfam Retinal pigment epithelial membrane protein 294 522 IPR004294 GO:0016702
Adu10g01996 524 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE-RELATED 13 281 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01996 K17913 - gmx:100794831 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01996 10 89800213 89805018 Adu10g01996 10 89800213 89805018 ECH