Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01954 ATGTCGAGTGATGATGCCGTGAAACCCGTACCCTACGCTCGCCGGCGCCCCACTGGAGAAGGTAGCAGCAGCTCCGGTTCCTCTCACCGCAAGCGCGCCAAATTTCTCCATCATTTCAATGACGTGGGGGAGGATGGATTTGATTCTAGCTGTGAGGTAGAGGGCGAAGGTGAATGTGATGAATCTGACGTAGCAAAAGTAGAAGATCAAGGGGTCAAAATGGATCTCACTGAGGATTTATTGCATATGGTTTTCTCATTTTTGGATCCTCTCAATCTATGCAAAGCTGCCAGGGTTTGTACGCAGTGGAGAACTGCTAGTGCTCATGAAGATTTCTGGAGGACTTTGAACTTCAAAGATCGTTACATTTCTCTGGAAGAATTTGAGGACATGTGTAGGCGATATCCTAGAGCCACAGCGGTGAGCATATCCGGTGCCACAATTTCCTCGCTTGTCATGAAGGCTATGTCTTCCCTGAGGAATCTTGAGGTTCTAACACTGGGAAAAGGACATATACCGGATGGGTTCTTCCATGCCTTGGAAGATTGCTCTATGTTGAAAAGACTGAGCATCAATGATGCTACACTTGGCAGCGGTATTCAGGAGATATCTATTACTCACTATAGGATGTGCCATCTTCAAATAACAAAATGCCGTGTGATGCGTATAGCAGTCAGGTGTCCACAGCTTGAAACCATGTCGTTGAAACGCAGTAATGTTGCACAGGCTGTGCTTAATTGCCCTCTTTTGCATGAACTTGACATAGGCTCTTGCCATAAACTTCCTGATTCTGCAATTCGCTCAGCTGCAACATCATGCCCCCAATTAGTTTCTTTGGATGTGTCTAATTGCTCATGTGTTAGTGATGAAACACTACGTGAAGTATCCTTCTCTTGTGCTAACCTTAGTTTCCTTGATGCCTCATACTGCCCAAATGTATCTCTTGAGTCTGTTAGACTTCCAATGTTGACAGTTCTTAAGCTTCACAGTTGTGAAGGCATCACCTCCACTTCAATGGCTGCAATAGCTCATAGTAGTTTGTTGGAGGTTTTGGAGCTTGATAATTGTAGTCTACTGACTTCAGTATCTTTAGATCTTCCACTTTTGCGAAATATAAGATTGGTACACTGTCGCAAATTAGCTGATTTGGACTTGAGGACTATAATGCTTTCTTCTATGGTGATGTCCAACTGCCCTGCACTCCGCCGAATCAATATCACTTCAAATTCACTTCAAAAATTAGCCATACCAAAGCAGGACAGCTTAACCACATTGGCTTTACAATGCCAATCCTTGCAAGAAGTAGATCTGTCTGAGTGCGAATCGTTGACAAACTCTGTATGTGATGTTTTTAGTTATGGAGGAGGATGCCCAATGTTGAAATTATTAACTCTTGATAATTGTGAGAATTTGACATCAATTCGATTTATCAGCACCTCTCTGGTCAGTCTCTCCCTTGGTGGTTGTCGAGCAATAACTAATCTCGAGTTATCTTGCCCAAAGCTTGAGAAAGTCATTTTGGATGGTTGTAATCATTTGGAAAGAGCATCATTCTGTCCTGTTGGTCTCCTGTCTCTTAATTTAGGAATATGTCCGAAACTGAACATACTCAGCATTGAAGCACCATTTATGGTTTCTCTCGAGTTGAAAGGATGTGGAGTACTGTCTGAAGCATTCATCAATTGTCCGCTCTTAACTTCTCTGGATGCTTCCTTTTGCAGCCAACTAACAGATGAATGCTTATCTGCTACCACTGCCTCATGCCCGTTAATTGAATCGTTAATATTAATGTCATGCCTATTGATTGGTTCGAAAGTACTTCATTCTCTGTGTTCACTTCCAAATTTGACGGTTCTTGACTTATCATACACTTTCTTGGTGGACTTGCAGCCTGTTTTTGAGTTTTGTTCACAACTAGAGGTGCTAAAGTTGCAAGCATGCAAATCTCTTTCCGACACTTCACTGGAACCTCTTTACAAAGGAGGTGCTTTACCTGCACTACAGGAGTTGGACTTGTCCCATGGAACACTCTGTCAGTCTGCCATAGATGAACTTCTTGTTTGCTGCACAAATCTCAGGCGTGTGAGCCTGAATGGCTGTGAGAATGTGCATGATTTGAAGTGGGGATGCAGTCATGGGCAGGTTGATGTGTCGCCTGCTCTGAAGATCCCATATGGTGTAAGTTCCCAGGAGAATGTGTTGGAGTCAAGTCAGGAATCCACCTGCTTACTTCAGAACCTCAACTGTGTGGGATGTACAAATATTATAAAGGTTGAGATTCCATCAAGGGCACATTGTTTAAATCTATTATTCTTAAACCTTTCGCTATCAAGGAATTTGAAGGAGGTCAATATTACTTGTCTCAACCTATGCTTTCTTAATTTAAGCAACTGTTCTTCGTTGGAAATTCTAAGGCTAGATTGTCCAAGATTGACCAGCCTATTTCTTCAGTCTTGCAGTATTGATGGGGAAGCTGTTGAAGCTGCCATATCAAAATGCAATATGCTGGAGACTCTTGATGTTCGCTTTTGTCAGAAGATAAGTTCAACAAGTGTTGCGAGATTCCGTACATCATGTTCTAGTTTGAAGCGGATATTCAGCAACTTGTCAAATTAA 2616 0.4251 MSSDDAVKPVPYARRRPTGEGSSSSGSSHRKRAKFLHHFNDVGEDGFDSSCEVEGEGECDESDVAKVEDQGVKMDLTEDLLHMVFSFLDPLNLCKAARVCTQWRTASAHEDFWRTLNFKDRYISLEEFEDMCRRYPRATAVSISGATISSLVMKAMSSLRNLEVLTLGKGHIPDGFFHALEDCSMLKRLSINDATLGSGIQEISITHYRMCHLQITKCRVMRIAVRCPQLETMSLKRSNVAQAVLNCPLLHELDIGSCHKLPDSAIRSAATSCPQLVSLDVSNCSCVSDETLREVSFSCANLSFLDASYCPNVSLESVRLPMLTVLKLHSCEGITSTSMAAIAHSSLLEVLELDNCSLLTSVSLDLPLLRNIRLVHCRKLADLDLRTIMLSSMVMSNCPALRRINITSNSLQKLAIPKQDSLTTLALQCQSLQEVDLSECESLTNSVCDVFSYGGGCPMLKLLTLDNCENLTSIRFISTSLVSLSLGGCRAITNLELSCPKLEKVILDGCNHLERASFCPVGLLSLNLGICPKLNILSIEAPFMVSLELKGCGVLSEAFINCPLLTSLDASFCSQLTDECLSATTASCPLIESLILMSCLLIGSKVLHSLCSLPNLTVLDLSYTFLVDLQPVFEFCSQLEVLKLQACKSLSDTSLEPLYKGGALPALQELDLSHGTLCQSAIDELLVCCTNLRRVSLNGCENVHDLKWGCSHGQVDVSPALKIPYGVSSQENVLESSQESTCLLQNLNCVGCTNIIKVEIPSRAHCLNLLFLNLSLSRNLKEVNITCLNLCFLNLSNCSSLEILRLDCPRLTSLFLQSCSIDGEAVEAAISKCNMLETLDVRFCQKISSTSVARFRTSCSSLKRIFSNLSN 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01954 871 Pfam F-box-like 79 118 IPR001810 GO:0005515
Adu10g01954 871 SUPERFAMILY RNI-like 355 654 - -
Adu10g01954 871 Gene3D Ribonuclease Inhibitor 320 537 IPR032675 -
Adu10g01954 871 SMART fbox_2 76 116 IPR001810 GO:0005515
Adu10g01954 871 Gene3D Ribonuclease Inhibitor 538 628 IPR032675 -
Adu10g01954 871 ProSiteProfiles F-box domain profile. 70 116 IPR001810 GO:0005515
Adu10g01954 871 PANTHER OS10G0396666 PROTEIN 27 833 IPR044703 GO:0010252|GO:1905393
Adu10g01954 871 PANTHER OS10G0396666 PROTEIN 27 833 - -
Adu10g01954 871 MobiDBLite consensus disorder prediction 1 31 - -
Adu10g01954 871 SUPERFAMILY L domain-like 524 865 - -
Adu10g01954 871 Gene3D Ribonuclease Inhibitor 72 319 IPR032675 -
Adu10g01954 871 Gene3D Ribonuclease Inhibitor 629 870 IPR032675 -
Adu10g01954 871 SMART LRR_CC_2 562 587 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 689 720 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 499 524 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 398 417 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 247 272 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 588 613 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 636 661 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 457 487 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 833 858 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 273 298 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 429 453 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 808 832 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 320 345 IPR006553 -
Adu10g01954 871 SMART LRR_CC_2 366 391 IPR006553 -
Adu10g01954 871 SUPERFAMILY RNI-like 99 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01954 Adu-Chr10 88255128 88260454 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01954 - - gmx:100782842 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01954 10 88255128 88260454 Adu10g01954 10 88255128 88260454 ECH