Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01939 ATGCAAAGAAACAAGTCACTTTGTGTTTGCCCCATTTTGAGTACTCTTCAATCTAGTGTCTTATTCGTGATGGGTAGCAGTACTACTACACAAAGATCACATTGTTGGCATTATTGGGGCATCATTGTAGCATGGCTTACATTGTTGGAAATGAAGATGATGGTGCATTATGTGAATGGTGAACTCAATTACAAGGAGGCTCTCACCAAGTCATTAATATTTCTAGAGGCACAAAGATCAGGAAAACTCCCTTCCAATAACAGGGTACCTTGGAGGGAAGACTCAGCCCTAGATGATGGAAAACTAGCTAATGTGGACCTTGTTGGAGGTTACTATGATGCTGGGGATAATGTAAAATATGGCCTCCCAATGGCTTTTACTATTACAACCCTATCATGGGCTGCAATTTTTTACAAATCAGAATTAGAAGCTACAAAGGAAATGGGGAATGTTCATGATGCCATTAGATGGGGCACTGATTATTTTCTCAAAGCTAGTTCTAGACGCAAAAGATTATATGTCCAGGTAGGGGACCCGGAAGAGGATCACCATTGTTGGGTTCGACCGGAAAATATGAAGACAAAAAGAACGGTTTTGAAGATTGATAGTAACACGCCAGGGACTGAGATTGCAGCTGAAACCGCCGCGGCAATGGCGGCTGCTTCTATCGTTTTTAGGGACTCTGATCGTAAATATTCACATAGTCTCCTAAACAAAGCGAAATCGGTATGTTACAATGTTTTGTTATATATAATTAAACACAATCATGCTCTTATTTTAATTTGTATCTTATTTTATTGGCAGCTTTTTGTGTTTTCGAAATCACACAAAGGAACCTATGATGGAGAGTGTCCCTTCTACTGCTCTTACTCAGGCTATAATGATGAACTTATGTGGGCAGCAACATGGTTATACATGGCTACGAGGAAGCCTGCGTATTTGAAGTACATAGAAGAAGAATCGATAAGTGCTAGCGTAACAGAATTTAATTGGGATCTTAAATATGCAGGAGCCCAAATCCTTCTTACCAAGTTACATTTTGAAGGAACAAAGAATTTGGACACATTCAAAGTTCATGCCGAAAGTTTCATATGTTCAGTTCATCCGGAAAGTCCCTATCATCAAATTAACTTATCCCCTGGTGGGTTCGTTCATTTGAGAGATGGTGCCAACACACAATATGCTACCGGGGCAGCATTGTTGTTCACTGTGTATGGTGATTTGCTTGCCAAACATAAACAGAAAATCACTTGCGGAGACAAACAATTTGATCCCTCTCACCTCCTCTCCTTTGCTAAGATACAAATGGATTATATACTAGGGAAGAACCCTGAAGGAAGATCATACATGGTAGGGTTTGGGAAGAACCCACCAACACAAGCTCACCATAGAGGTGCATCCATGCAAAAGTTGCCAAAGGATGAAGAAGTAAACTGTCCCACGAGCTTCTCAAAATGGTTGAATAAAGACCAACCTAACCCCAATGAGCTCACCGGTGCTATTCTTGGTGGACCTGACGGCAATGACAAGTTCAAAGACAAGCGTTGGGAATCTGTTTACACTGAGCCATGCACATACATTAATTCTCTAGCAGTTGGACCTTTAGCCAAGCTTGCATCTTTGTCTTAA 1629 0.4088 MQRNKSLCVCPILSTLQSSVLFVMGSSTTTQRSHCWHYWGIIVAWLTLLEMKMMVHYVNGELNYKEALTKSLIFLEAQRSGKLPSNNRVPWREDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTITTLSWAAIFYKSELEATKEMGNVHDAIRWGTDYFLKASSRRKRLYVQVGDPEEDHHCWVRPENMKTKRTVLKIDSNTPGTEIAAETAAAMAAASIVFRDSDRKYSHSLLNKAKSVCYNVLLYIIKHNHALILICILFYWQLFVFSKSHKGTYDGECPFYCSYSGYNDELMWAATWLYMATRKPAYLKYIEEESISASVTEFNWDLKYAGAQILLTKLHFEGTKNLDTFKVHAESFICSVHPESPYHQINLSPGGFVHLRDGANTQYATGAALLFTVYGDLLAKHKQKITCGDKQFDPSHLLSFAKIQMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASMQKLPKDEEVNCPTSFSKWLNKDQPNPNELTGAILGGPDGNDKFKDKRWESVYTEPCTYINSLAVGPLAKLASLS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01939 542 PANTHER ENDO-1,4-BETA-GLUCANASE 41 539 - -
Adu10g01939 542 PANTHER ENDOGLUCANASE 16-RELATED 41 539 - -
Adu10g01939 542 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 438 464 IPR018221 -
Adu10g01939 542 Pfam Glycosyl hydrolase family 9 64 533 IPR001701 GO:0004553|GO:0005975
Adu10g01939 542 SUPERFAMILY Six-hairpin glycosidases 62 539 IPR008928 GO:0005975
Adu10g01939 542 Gene3D - 59 250 IPR012341 GO:0005975
Adu10g01939 542 Gene3D - 267 542 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01939 Adu-Chr10 87870298 87872579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01939 58 540 Glycoside Hydrolase AT3G43860 67.769 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01939 K01179 - gmx:100811509 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01939 10 87870298 87872579 Adu10g01939 10 87870298 87872579 ECH