Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01798 ATGAGTATGAATTTATGTTCTTCCTTTTTCTTCATGTTCTTCATTGCGACCCCTTTTACCTGCATCATCCATGTTTGCTCAGCAGATTGTGATAATCTACAAGATACATGCCCGACATCTTTGCCAGAAAAGGAAACCATATTCATCAATGGCCTACCCTGCAAGAGTAAAGACAACAACACTGCTCAGGATTTCAAGACCGCAGAACTGACAAGGGCTGGTCCTAGAGACAATTTCTTCGGCTCCTCAATGAACATAGTTAGTGCTTCCAAGTTCCCCGGCCTTAACACGCTTGGCATCTCGATTAGTAGAATTGACATTGAAGTGGACGGGATGGTAAACCTCCACAATCATCCAAGAGCCACCGAGATGATCTATGTCAACCAAGGGGTGCTGGCAGCAGCATTTCTTGATACGCAAAACCAGTTTTTCCAAAACCAGAATCCAGGGTTGGGCTCCCTCAGTGCTTCTACACCTTCTGAGACCACATTGGAGTCGGTAGAGAACCTAAAGCGGAAACTCATAACCTCATTTTCTGACTTAGAACTTCATCATGGCACTACTGATTTGGCCTCACAAATACTAGAGATCATATACAGTTAG 603 0.4411 MSMNLCSSFFFMFFIATPFTCIIHVCSADCDNLQDTCPTSLPEKETIFINGLPCKSKDNNTAQDFKTAELTRAGPRDNFFGSSMNIVSASKFPGLNTLGISISRIDIEVDGMVNLHNHPRATEMIYVNQGVLAAAFLDTQNQFFQNQNPGLGSLSASTPSETTLESVENLKRKLITSFSDLELHHGTTDLASQILEIIYS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01798 200 SMART Cupin_1_3 68 171 IPR006045 -
Adu10g01798 200 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 21 146 - -
Adu10g01798 200 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 21 146 - -
Adu10g01798 200 SUPERFAMILY RmlC-like cupins 29 138 IPR011051 -
Adu10g01798 200 Pfam Cupin 72 146 IPR006045 -
Adu10g01798 200 ProSitePatterns Germin family signature. 111 124 IPR019780 GO:0030145
Adu10g01798 200 Gene3D Jelly Rolls 28 174 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01798 Adu-Chr10 82816953 82817643 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01798 24 147 Miscellaneous Gene Families AT3G05930 39.200 7.14e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01798 - - mtr:MTR_3g096330 197.978