Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01767 ATGCCAATTGATTGTTGGAATGATGTTTGGAGAAAACTGCATCAGCAAATTGTAAATGTTGATGTCATTAATGTGGATACTGTACCTTTTGAAGTTTACACAACTGTCGCAACTGCAGTCATATGGTCTATGCGTCTTGCTGTGGCTGTTGGGTTTTACGTGTGGATTGATAATTTGATGAGACCAATATATTCAAAGTTGATACCTTGTGATTTAGGATCTCCTACCCAGCAAACTAAGCAGCCACTCAAACGCCAAGCACTTGGATCGCTGGGCAAAAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTCACTTTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAATTGCAAGAGATTGTACGAATTTTAAAGAATGATGAGGAGTTTCAAGACAAAGGAATTTATTGCCCAAAAGGTGTGCTTCTCCATGGACCTCCAGGAACGGGTAAAACTCTACTGGCTAAAGCCATCGCTGGGGAAGCAGGGTTGCCTTTTTTTGCGGCAAATGGCACAGATTTTGTAGAGATGTTTGTAGGGGTTGCTGCATCACGTGTTAAGGATCTTTTTGCTAGTGCAAGGTCATTTTCACCTTCTATCATATTTATTGATGAGATAGATGCTATTGGTAGCAAGCGTGGAGGACCTGACATTGGTGGAGGAGGTGCTGAACGGGAACAAGGCTTACTTCAGATACTTACTGAGTTGGATGGATTCAAAGTTTCTACAGCACAGGTGCTTGTGATCGGTGCTACAAATAGATTAGACATTCTTGATCCTGCTTTGTTGAGGAAGGGTCGTTTTGACAAGATCATTCGAGTTGGTTTGCCATCAAAGGATGGAAGATTTGCCATTTTGAAGGTGCATGCTAGGAATAAATTCTTTCGCTCCGAGGAGGAAAAGGAGATTCTTCTTAGGGAAATTGCAGAGCTTACAGAAGATTTTACTGGAGCAGAGCTACAAAATATACTGAATGAAGCTGGAATTTTGACAGCCAGGAAGGATTTGGATTACATTGGGCGAGATGAGCTACTTGAGGCATTAAAGAGGCAAAAAGGAACTTTTGAAACAGGGCAAGAGGATAGTGCTGAAATTCCTGAAGAATTGAAGCTTAGACTGGCATACAGAGAAGCGGCAGTTGCTATTCTTGCATGTTATTATCCTGAACCACACCGCCCTTTTGTTGAGACTAATATAAACTCAATCCAGAGCCGGCCAAATATGAGTTATTCTGAGACTACTGGCCAAGTTTTTGCGAGGAAGTCAGATTATGTAAATTCTATTATCCGTGCATGTGCTCCAAGAATAATTGAGGAGGAGATGTTTGGAATTGACAACTTATGTTGGATCTCTGCAAAGTCAACGTTAGAAGCTTCAAGGCGTGCTGAGTTTTTAATTTTACAGACAGGAATGACAGCATTTGGGAAAGCATACTTCAAAAACGAAAGTGATCTTGTACCTAATCTTGCAATGAAGCTTGAAGCGCTCCGAGATGAGTATATGCGTTATGCTACAGAAAGGTGTTCATCCGTGCTCAGAGAATACCAGGAAGCAGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGGCAAATCAAAGCTGAGGAGATATGGGACATTTACAAGAGTGCTCCTCGTCTAACTCAGCCTCCTGTGAGTCCAGTTGATGAATATGGAGCACTGATTTATGCTGGACGATGGGGAATCCATGGGATCAGCCTTCCGGGAAGAGTTACATTCGCACCTGGCAATGCCGGGTTTGCGACCTTTGGAGCTCCTCGCCCAACCGAGACACAAATTGTGAGCGACGAAACTTGGAAGCTAGTAGATGGTATATGGGACAAAAAGATTCAAGATATTAGAGATGAATCTACAAAGGTGATCGAAGAAGAGAAAGAAACGCCACAACTTTTGATGGCAAGCCATTTCCTTTGA 1950 0.4221 MPIDCWNDVWRKLHQQIVNVDVINVDTVPFEVYTTVATAVIWSMRLAVAVGFYVWIDNLMRPIYSKLIPCDLGSPTQQTKQPLKRQALGSLGKSRAKFISAEERTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQDKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASARSFSPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTELDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRFAILKVHARNKFFRSEEEKEILLREIAELTEDFTGAELQNILNEAGILTARKDLDYIGRDELLEALKRQKGTFETGQEDSAEIPEELKLRLAYREAAVAILACYYPEPHRPFVETNINSIQSRPNMSYSETTGQVFARKSDYVNSIIRACAPRIIEEEMFGIDNLCWISAKSTLEASRRAEFLILQTGMTAFGKAYFKNESDLVPNLAMKLEALRDEYMRYATERCSSVLREYQEAVETITDILLEKGQIKAEEIWDIYKSAPRLTQPPVSPVDEYGALIYAGRWGIHGISLPGRVTFAPGNAGFATFGAPRPTETQIVSDETWKLVDGIWDKKIQDIRDESTKVIEEEKETPQLLMASHFL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01767 649 PANTHER METALLOPROTEASE M41 FTSH 1 618 - -
Adu10g01767 649 Gene3D Peptidase M41 364 551 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu10g01767 649 Pfam AAA+ lid domain 310 350 IPR041569 -
Adu10g01767 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 355 IPR027417 -
Adu10g01767 649 CDD AAA 113 281 - -
Adu10g01767 649 ProSitePatterns AAA-protein family signature. 251 269 IPR003960 GO:0005524|GO:0016887
Adu10g01767 649 SMART AAA_5 142 283 IPR003593 -
Adu10g01767 649 Pfam ATPase family associated with various cellular activities (AAA) 146 280 IPR003959 GO:0005524|GO:0016887
Adu10g01767 649 SUPERFAMILY FtsH protease domain-like 371 552 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Adu10g01767 649 Coils Coil 299 326 - -
Adu10g01767 649 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 1 618 - -
Adu10g01767 649 Gene3D - 90 280 IPR027417 -
Adu10g01767 649 Gene3D - 282 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01767 Adu-Chr10 81607606 81611949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01767 107 390 Miscellaneous Gene Families AT3G47060 46.831 4.98e-69 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01767 - - ahf:112783256 1268.83