Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01666 ATGTCGTTGTCCTCCTCCTCCTCCTCCTCCTCCTCAGAATCGGAATCAGAACCTCCGACGGGCATATGCCTGATCCCCTCCCTACCTGATGACGTGGCACTGAACTGCCTAGCACGCATCCCTAGGCCCTACCACCCCGTCCTCTCCCTTGTCTCGAAGCCCATCCACTCCCTTTTCTCCTCCCCTCACTTTTACCAGGCCCGCTTTCTTCTTAACTCCACCCAACACCACCTCTACCTCACGCTCCGCTCACGCGCCTCCACCCTCCTCTGGTTCACTCTCCATCGAACCCCGTCCCGCATCCTCCTCGTCCCGCTCCCCTCTCAACCCTCCCCCGCTATCGGCTCTGCCTACGCCGTTCTCGGCTCCACCATTTACGTCATCGGCGGCTCCATTAACGACGTTCCCTCTTCTCACATCTGGCTCCTCGACTGCCGCTTCCACCGATGGCGACGTGGACCCTCTATGCGCGTCGGCCGCGAGTTCGCCGCTGCGGGAGTCGTCGACGGAAAGATTTACGTCATCGGAGGCTGCGTCGCTGACAATTGGGCCAGGTCGGCCAACTGGGCGGAGGTTCTTGACCCCGCCTCCGAGAAATGGGAGCGCGTGGCGAGCCCCGCGGAGGTTCGGGAGAAGTGGATGCACGCAAGCGCCGTAGTGGACGGCAAGGTGTACGCCATGGCGGATCGCGGCGGCATCGCGTTGGATCCCCGATGCGGCGCTTGGGAGAGCGTGGGAACGGAGCTGGACCTCGGGTGGCGAGGGAGGGCGTGCGTGGTGGATGATATTCTTTATTGCTACGATTACTTGGGGAAGATTAAAGGGTTCGATGTGAAGAGTGGGGTATGGAAAGAGCTGAAGGGGTTGCATAAGGGGTTGCCTCGGTTTCTGTGTGGTGCTACCATGGCTGATTTGGGTGGGAAGTTGGTTGTGGTGTGGGAGTGTGGTGGTGGGAATGGGAAAGACATGGACATTTGGTGTGCTGAGATTCAAGTTAGCAAGAAGAATGGTGAACTGTGGGGTGAGGTTGATTGGTTTCAGAAGGTTCTTTCTGTTCCCAAAGGCTCTTCTATTGTGCACTGTTCTTCAGTTGCTTTGTGA 1101 0.5858 MSLSSSSSSSSSESESEPPTGICLIPSLPDDVALNCLARIPRPYHPVLSLVSKPIHSLFSSPHFYQARFLLNSTQHHLYLTLRSRASTLLWFTLHRTPSRILLVPLPSQPSPAIGSAYAVLGSTIYVIGGSINDVPSSHIWLLDCRFHRWRRGPSMRVGREFAAAGVVDGKIYVIGGCVADNWARSANWAEVLDPASEKWERVASPAEVREKWMHASAVVDGKVYAMADRGGIALDPRCGAWESVGTELDLGWRGRACVVDDILYCYDYLGKIKGFDVKSGVWKELKGLHKGLPRFLCGATMADLGGKLVVVWECGGGNGKDMDIWCAEIQVSKKNGELWGEVDWFQKVLSVPKGSSIVHCSSVAL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01666 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 12 350 - -
Adu10g01666 366 Gene3D - 72 345 IPR015915 GO:0005515
Adu10g01666 366 SUPERFAMILY F-box domain 17 84 IPR036047 GO:0005515
Adu10g01666 366 SUPERFAMILY Kelch motif 88 332 IPR015915 GO:0005515
Adu10g01666 366 SMART kelc_smart 124 170 IPR006652 GO:0005515
Adu10g01666 366 SMART kelc_smart 171 222 IPR006652 GO:0005515
Adu10g01666 366 Pfam Kelch motif 162 205 IPR006652 GO:0005515
Adu10g01666 366 Pfam Kelch motif 116 157 IPR006652 GO:0005515
Adu10g01666 366 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 12 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01666 Adu-Chr10 75972701 75974123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01666 28 350 Miscellaneous Gene Families AT4G33900 37.110 3.73e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01666 - - gmx:100798508 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01666 10 75972701 75974123 Adu10g01666 10 75972701 75974123 ECH