Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01640 ATGGAGTGTATTGGTAGGCCTTCCAATGGAGAGAGCAGCGTAGTTCGGTTCCCATTGTCACCATCGAGCTCTTTGGTCATTCAGAAAGGAGATATCACCAAATGGTCCATCGATGGTTCCTCCGATGCAATAGTAAATCCTGCAAATGAGAGAATGCTTGGCGGTGGTGGTGCAGATGGCGCGATACATATGGCTGCTGGTCCTGAACTTGTTCAAGCATGTTATAGTGTTCCAGAGGTGAGGCCTGGAATTCGGTGCCCAACTGGGGAGGCAAGGATCACACCTGGTTTTAGATTGCCTGCTTCTCATGTTGTTCATACTGTTGGACCAATCTACAATTCTAATAGTAACCCTGCTGCTTCTCTTTCAAGCGCTTATAGGAATAGTTTGAGGGTTGCGAAGGATAAAAATATTCAGTATATAGCATTCCCAGCTATATCATGTGGTGTCTTTGGATATCCTTACGATGAGGCTGCCACGGTAGCAATTTCTGTCGTCAGGGAGTTTCGAAATGAGTTTAAGGAGATCCACTTCGTTATGTTCTTGCAAGATATTTATCAAGTTTGGATAGCTTCTCTCCCAATTCGCAGGGCTTCACGCCGACACCAGCATCCATTTAGTTTCATTCCTCGCTTTTTTCTCCCTTCTAGAAAAAAAGAGAAGATGGGTGAGGGAGAACAATTTCAGCTGGGAACTGTTGGTGCATTGTCACTATCTGTTGTGTCATCAGTGTCGATTGTGATTTGCAATAAGGCGCTTATGAGCACATTACATTTCATTTTTGCTACAACTTTGACAAGTTGGCATCTGCTTGTCACATTTTGTTCTCTTCATGTGGCGCTAAAAATGAGATTGTTTGAACACAAGCCTTTTGACCAGAAAGCTGTTATGGGATTCGGAATTCTAAATGGAATCTCAATAGGACTTTTAAATTTGAGCCTTGGATTCAATTCTGTTGGTTTCTTTCAGATGACTAAGCTGGCAATCATTCCATGTACCATTCTTTTGGAGATCCTTTTTCTCGGGAAAAAATTCAGTAAAAGAATTCAATTTTCCCTTGCCATTCTCCTTCTTGGTGTTGGGATTGCAACAGTCACCGATTTGCAGCTCAACGTTTTGGGCTCTTTCTTGTCTCTTCTAGCAGTGGTTACAACATGTGTTGCTCAGATTATGACAAACACTATTCAGAAGAAGTTCAAGGTTTCTTCCACCCAACTTCTGTATCAATCATGTCCATACCAAGCAGCAACTCTGTTAGTCTCTGGTCCATTTTTGGATAAATTTTTGACCAACCAAAATGTTTTTGCTTTCAACTATACAACACAAGTGACGGTAAGGGTTGAAAATTCTTCTCCCACCCTTCTTTTCATCCAACTTTTTCCTTTAATAATTTCTGTATGTTCTCTGTTGTTTCCTTCTTCATTGTAG 1428 0.4146 MECIGRPSNGESSVVRFPLSPSSSLVIQKGDITKWSIDGSSDAIVNPANERMLGGGGADGAIHMAAGPELVQACYSVPEVRPGIRCPTGEARITPGFRLPASHVVHTVGPIYNSNSNPAASLSSAYRNSLRVAKDKNIQYIAFPAISCGVFGYPYDEAATVAISVVREFRNEFKEIHFVMFLQDIYQVWIASLPIRRASRRHQHPFSFIPRFFLPSRKKEKMGEGEQFQLGTVGALSLSVVSSVSIVICNKALMSTLHFIFATTLTSWHLLVTFCSLHVALKMRLFEHKPFDQKAVMGFGILNGISIGLLNLSLGFNSVGFFQMTKLAIIPCTILLEILFLGKKFSKRIQFSLAILLLGVGIATVTDLQLNVLGSFLSLLAVVTTCVAQIMTNTIQKKFKVSSTQLLYQSCPYQAATLLVSGPFLDKFLTNQNVFAFNYTTQVTVRVENSSPTLLFIQLFPLIISVCSLLFPSSL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01640 475 ProSiteProfiles Macro domain profile. 12 197 IPR002589 -
Adu10g01640 475 Pfam Triose-phosphate Transporter family 242 418 IPR004853 -
Adu10g01640 475 SMART YBR022w_8 24 162 IPR002589 -
Adu10g01640 475 PANTHER SOLUTE CARRIER FAMILY 35 223 446 - -
Adu10g01640 475 SUPERFAMILY Macro domain-like 22 196 IPR043472 -
Adu10g01640 475 Pfam Macro domain 45 162 IPR002589 -
Adu10g01640 475 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 223 446 - -
Adu10g01640 475 Gene3D Leucine Aminopeptidase, subunit E, domain 1 8 199 IPR043472 -
Adu10g01640 475 CDD Macro_OAADPr_deacetylase 25 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01640 Adu-Chr10 74416991 74430211 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01640 222 433 Organic Solute Cotransporters AT1G21870 25.339 7.18e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01640 K15285 - gmx:100786535 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03120 03 116062080 116064373 Adu10g01640 10 74416991 74430211 PCT