Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01599 ATGTCCATTAGGCTGATAATTCTAATCAGGGTCATTTTGATAACCTTGATCAATGCAGGCAAGGAGGATGGTTATGGGGTTGTGAAGAATCTTGAGATTCCACAGGACTCAACTTATACTACCAAATATAATCCTTCAAATACACAACTATGGCACCCTGGCCTAGTTTCCTTATTCTCTTTACATTTTTCTCTAACACTCTCTTACACATTCACCCTAATCAACAACTGCCCTCATACCATATGGCCTGGTACACTTGCTGGTTCAGGGAGCCCTAAACTATCAACGACTGGATTCCAGTTGGACTCGGGCCAAAGTGTCAGACTAACCACGGTACCAGGATGGTCAGGACGAATATGTGCAAGGACAGGTTGCAAATTTGACGTCACAGGAGCTGGCAAATGCCTAACTGGTGACTGTGGAGGAAAACTGGAATGTGATGGAAATGGTGCTGCACCTCCTACCTCACTGTTTGAGATAACACTCGATGGAGCCAATGGACAAGATTTCTACGATGTCAGCATGGTAGATGGCTACAATTTGCCGTTACTGGCTCTACCACGAGGTGTATCTGGTGGAGCCTGTAATGCTACAGGATGCGTGACTGATGTCAACAGAGGTTGTCCTAGAGAACTTCAAGTGCTTGTGAAGAAGGAAACCAGCGTGGTGTAG 672 0.4554 MSIRLIILIRVILITLINAGKEDGYGVVKNLEIPQDSTYTTKYNPSNTQLWHPGLVSLFSLHFSLTLSYTFTLINNCPHTIWPGTLAGSGSPKLSTTGFQLDSGQSVRLTTVPGWSGRICARTGCKFDVTGAGKCLTGDCGGKLECDGNGAAPPTSLFEITLDGANGQDFYDVSMVDGYNLPLLALPRGVSGGACNATGCVTDVNRGCPRELQVLVKKETSVV 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01599 223 Pfam Thaumatin family 75 218 IPR001938 -
Adu10g01599 223 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 56 218 - -
Adu10g01599 223 SUPERFAMILY Osmotin, thaumatin-like protein 70 216 IPR037176 -
Adu10g01599 223 ProSitePatterns Thaumatin family signature. 131 146 IPR017949 -
Adu10g01599 223 Gene3D Thaumatin 69 223 IPR037176 -
Adu10g01599 223 PANTHER OS03G0233200 PROTEIN 56 218 IPR001938 -
Adu10g01599 223 SMART tha2 71 221 IPR001938 -
Adu10g01599 223 PRINTS Pathogenesis-related protein signature 169 185 IPR001938 -
Adu10g01599 223 PRINTS Pathogenesis-related protein signature 131 160 IPR001938 -
Adu10g01599 223 PRINTS Pathogenesis-related protein signature 70 82 IPR001938 -
Adu10g01599 223 PRINTS Pathogenesis-related protein signature 118 129 IPR001938 -
Adu10g01599 223 ProSiteProfiles Thaumatin family profile. 68 214 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01599 Adu-Chr10 70553181 70556945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01599 55 215 Receptor kinase-like Gene Family AT5G38280 47.273 2.40e-45 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01599 - - adu:110276894 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01599 10 70553181 70556945 Adu10g01599 10 70553181 70556945 ECH