Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01133 ATGCTCCCATCAAATCGGAGTGATTGCAGTGATGTGCCAATCATAGATGCTTTGGTACGAGGTGTGCGAGTGATTGAACTTGATTTATGGCCGAATTCAACTAAAGATGATGTTGAGGTTTTTCATGGAAGAACTCTTACCACTCCCGTCTCACTAAGGCAATGTTTGTGGTCCATAAGAGAGCATGCGTTTGTTACATCTAAGTATCCTGTCATTATAACTTTTGAAGACCACCTTACTCCTGATCTTCAGGCTGTAGTTGCAGAGATGGTGACTGAAATATTTGGAGAACTGCTTTATTATCCTGAGACAGATTTGCTGTCTGAATTCCCCTCCCCAGAATCGTTGAAAGGTCGAATTCTCATATCAACTAAACCACCAATAGAATATCTTGATTCCAAATCCTGTGACGAGGAAGATAAAAAACCAAAATCAACTGACAAAGGATCACAATCACCAGATGTTACTAATAAAGTGGAAACTGATGACAAAGATGTGGAAGATTTGAATGAAAGTGATGAAAAATCATACAAGGAGAGTGCACCTAAGTATAAACGTCTGATTACAATTCATGCTGGCAAATCAAAGGGTGATTTTCAGGAAGACTTGAAGGTTGCTGGTAAAGTTAAGCGTTTGAGCTTGAGTGAAAGTAAACTTGAAAAGGCTTCTGAATCTTTTGCACCTGACATTGTAAGGTTCACCCAGAAGAATATTCTGAGAGTGTATCCAAAGGGAACACGCATAACTTCCTCAAATTACAAGCCACACATAGCATGGACGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGCATGGCAAATCACTTTGGTTCATGCAAGGGATGTTCAAAGCAAATGGAGGGTGTGGCTATGTGAAAAAACCTGATTTTCTTGTCGAAAAAGGTCCGAATAACGAGGTTTTCGATCCTAAAAGAACATTGCCGGTGAACAAGACATTAAAGGTAAAAGTCTACTTGGGGACAGGTTGGAGCTCAGATTTCAGCCTAACGGACTTCGATTCCCATTCACCACCAGACTTCTATGTGAAGATTGATATTGCTGGAGTACCTGCTGATAGAGCGAAGAAGAAAACAAAGACAATTAAAAATAACTGGTTTCCCGTGTGGGAAGAAGAGTTTGAATTCCCATTAAGTGTCCCAGATCTGGCTTTGCTACGTATACAAGTTAAAGAAGAAAATAGAACTGAGAAGGATGATTTTGCTGGCCAGACATGTTTGCCAGTCACAGAGCTCAAGTCTGGATTTCGTTCAGTCCCTCTCTATGATGAAAAGGGCGAGAAATATAAATCTGTCAAGCTTTTAATGCGGTTTCAATTCAAATGA 1347 0.4039 MLPSNRSDCSDVPIIDALVRGVRVIELDLWPNSTKDDVEVFHGRTLTTPVSLRQCLWSIREHAFVTSKYPVIITFEDHLTPDLQAVVAEMVTEIFGELLYYPETDLLSEFPSPESLKGRILISTKPPIEYLDSKSCDEEDKKPKSTDKGSQSPDVTNKVETDDKDVEDLNESDEKSYKESAPKYKRLITIHAGKSKGDFQEDLKVAGKVKRLSLSESKLEKASESFAPDIVRFTQKNILRVYPKGTRITSSNYKPHIAWTHGAQMVAFNMQGHGKSLWFMQGMFKANGGCGYVKKPDFLVEKGPNNEVFDPKRTLPVNKTLKVKVYLGTGWSSDFSLTDFDSHSPPDFYVKIDIAGVPADRAKKKTKTIKNNWFPVWEEEFEFPLSVPDLALLRIQVKEENRTEKDDFAGQTCLPVTELKSGFRSVPLYDEKGEKYKSVKLLMRFQFK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01133 448 PRINTS Phospholipase C signature 12 32 IPR001192 GO:0035556
Adu10g01133 448 PRINTS Phospholipase C signature 109 126 IPR001192 GO:0035556
Adu10g01133 448 PRINTS Phospholipase C signature 238 259 IPR001192 GO:0035556
Adu10g01133 448 PRINTS Phospholipase C signature 259 277 IPR001192 GO:0035556
Adu10g01133 448 PRINTS Phospholipase C signature 414 424 IPR001192 GO:0035556
Adu10g01133 448 Pfam Phosphatidylinositol-specific phospholipase C, X domain 7 125 IPR000909 -
Adu10g01133 448 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 14 125 - -
Adu10g01133 448 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 6 447 IPR001192 GO:0035556
Adu10g01133 448 SMART plcx_3 5 125 IPR000909 -
Adu10g01133 448 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 210 298 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01133 448 SUPERFAMILY PLC-like phosphodiesterases 6 301 IPR017946 GO:0006629|GO:0008081
Adu10g01133 448 ProSiteProfiles C2 domain profile. 301 430 IPR000008 -
Adu10g01133 448 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 6 447 - -
Adu10g01133 448 Gene3D C2 domain 315 448 IPR035892 -
Adu10g01133 448 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 213 299 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01133 448 Gene3D Phosphatidylinositol (PI) phosphodiesterase 4 313 IPR017946 GO:0006629|GO:0008081
Adu10g01133 448 SMART plcy_3 184 300 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01133 448 MobiDBLite consensus disorder prediction 131 148 - -
Adu10g01133 448 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 320 447 IPR035892 -
Adu10g01133 448 MobiDBLite consensus disorder prediction 157 178 - -
Adu10g01133 448 CDD C2_PLC_like 319 448 - -
Adu10g01133 448 Pfam C2 domain 321 422 IPR000008 -
Adu10g01133 448 MobiDBLite consensus disorder prediction 131 178 - -
Adu10g01133 448 SMART C2_3c 320 428 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01133 Adu-Chr10 23641611 23647859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01133 7 448 Acyl Lipid Metabolism Gene Families AT2G40116 64.080 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01133 K05857 - gmx:100799027 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01133 10 23641611 23647859 Adu07g00794 07 9704240 9704476 ECH
Adu10g01133 10 23641611 23647859 Adu10g01133 10 23641611 23647859 ECH
Adu10g01133 10 23641611 23647859 Adu07g00794 07 9704240 9704476 PCT