Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01130 ATGTCCAAACAGACTTACAGAGTTTGCTTCTGCTGCCGCCGGCGATTCAAGCTCGCCGTGTCGGAGGCGCCGCCGGAGATAAGGAATCTCTTCGACCGGTACTCCGAGAACGGGCTCATGACGGCGTCGCATCTGCGGAGCTTCATGGTTGAAGTGCAGAGAGAGGAGACAGCGACGGAGGAGGAAGCGCAGGGAATCATTGATGGACTCAAGCATCTCAGTATCTTCCATAGAAGAGGTCTCAATCTCGAAAGTTTCTTTAAGTTCCTCTTCAGTGATAACAATCCACCACTTGCACAACCAATGGTGCACCATGATATGAATGCACCATTGTCTCATTATTATATATTTACCGGTCACAATTCCTATCTGACGGGAAATCAGCTTAGTAGTGACTGCAGTGATGTCCCCATCATACGTGCACTGCAGAGAGGTGTTAGGGTCATTGAATTGGATATATGGCCCAATGCATCAAAGGATGATGTGGATGTTCTTCATGGAAGGACATTGACTACTCCCGTGGCACTCATCAAATGTTTGAGGTCTATTAAGGAGCATGCTTTTGTTGCATCAGAATATCCAGTTGTAATAACCTTAGAAGACCATCTTACTCCTGATCTTCAAGCCAAAGTGGCTGAGATGATTACTCAAACTTTTGGAGACATACTATTTTGTCCTACCCCAGAAAGTGTGAAGGAATTCCCTTCTCCAGAATCACTTAAAAGAAGGGTCATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGACATAAAGGAAAAGGAGGATGAATCACATCAGGGAAAGGCTTTGGGTGACGAAGAAGCATGGGGGAAGGAAGTCCCAAGTCTTAAAGGCGGTACTATTGCTGATTACAAGAACAATGGGAATGATGATGATGATGATGATGATGATGATGATGACAATGACGATGATGATGAGGAAGATGCTGATGAAGAAAAGTCTCGTCAAGATGTATGTGCTGAATATCGACGTTTGATCGCTATTCATGCTGGAAAGCCCAAAGGAGGATTACTTGAAGGTCTTAGAGTGGATCCTGATAAAGTGAGGCGATTAAGTCTAAGCGAGCAGCAGCTTGAAAATGCTGCTTTATCTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGCACTCGCATTACCTCGTCGAATTATAACCCATTAATTGGGTGGATGCACGGAGCGCAAATGGTTGCATTTAACATGCAGGTTTCTATTTCCCAACCTTTTTTTCTTTCGAAAAAAGAAAAATTGAAAGAAAACAAATTCCTGATTCTCCCTTTTTTAGTTGTTGTAATTAAGGTTTCTAAATGTGAGGTCTGA 1374 0.4323 MSKQTYRVCFCCRRRFKLAVSEAPPEIRNLFDRYSENGLMTASHLRSFMVEVQREETATEEEAQGIIDGLKHLSIFHRRGLNLESFFKFLFSDNNPPLAQPMVHHDMNAPLSHYYIFTGHNSYLTGNQLSSDCSDVPIIRALQRGVRVIELDIWPNASKDDVDVLHGRTLTTPVALIKCLRSIKEHAFVASEYPVVITLEDHLTPDLQAKVAEMITQTFGDILFCPTPESVKEFPSPESLKRRVIISTKPPKEYLEAKDIKEKEDESHQGKALGDEEAWGKEVPSLKGGTIADYKNNGNDDDDDDDDDDDNDDDDEEDADEEKSRQDVCAEYRRLIAIHAGKPKGGLLEGLRVDPDKVRRLSLSEQQLENAALSHGKEIVRFTQRNILRVYPKGTRITSSNYNPLIGWMHGAQMVAFNMQVSISQPFFLSKKEKLKENKFLILPFLVVVIKVSKCEV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01130 457 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 421 IPR001192 GO:0035556
Adu10g01130 457 SUPERFAMILY PLC-like phosphodiesterases 105 420 IPR017946 GO:0006629|GO:0008081
Adu10g01130 457 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 361 421 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01130 457 MobiDBLite consensus disorder prediction 298 322 - -
Adu10g01130 457 MobiDBLite consensus disorder prediction 255 282 - -
Adu10g01130 457 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 362 420 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01130 457 MobiDBLite consensus disorder prediction 255 326 - -
Adu10g01130 457 PRINTS Phospholipase C signature 233 250 IPR001192 GO:0035556
Adu10g01130 457 PRINTS Phospholipase C signature 110 128 IPR001192 GO:0035556
Adu10g01130 457 PRINTS Phospholipase C signature 136 156 IPR001192 GO:0035556
Adu10g01130 457 PRINTS Phospholipase C signature 408 426 IPR001192 GO:0035556
Adu10g01130 457 PRINTS Phospholipase C signature 387 408 IPR001192 GO:0035556
Adu10g01130 457 Gene3D Phosphatidylinositol (PI) phosphodiesterase 101 433 IPR017946 GO:0006629|GO:0008081
Adu10g01130 457 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 105 249 - -
Adu10g01130 457 SUPERFAMILY EF-hand 24 99 IPR011992 -
Adu10g01130 457 Gene3D - 22 100 - -
Adu10g01130 457 Pfam Phosphatidylinositol-specific phospholipase C, X domain 107 249 IPR000909 -
Adu10g01130 457 SMART plcy_3 332 430 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Adu10g01130 457 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 421 - -
Adu10g01130 457 SMART plcx_3 105 249 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01130 Adu-Chr10 23580899 23585978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g01130 1 420 Acyl Lipid Metabolism Gene Families AT3G08510 65.321 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01130 K05857 - gmx:100784534 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01130 10 23580899 23585978 Adu07g00793 07 9668049 9672199 ECH
Adu07g01480 07 30202392 30206803 Adu10g01130 10 23580899 23585978 ECH
Adu10g01130 10 23580899 23585978 Adu10g01130 10 23580899 23585978 ECH
Adu10g01130 10 23580899 23585978 Adu07g00793 07 9668049 9672199 PCT