Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g01102 ATGAAATATCATCTTACAAAAATTTCTAGACAAATTAAAGTTTGTAACAAAGTGTTTGAAGATGTTGAACTTCAATTCAAAAGGCTTTTGGAGGAAAACAAAAAAATAAGTGCCAAAACGTGGAAAGAAGTTTGCTTTGCATGTGTTGATGCAGAGGAGTTCCGTTTGGCCCAAATATGTGGACTCAACATTATTGTTCAGGTGGATGACTTGGAAGAAGTTAGTGAATATTACCAAAATAGAGGTTGCTTCAATAATGAGAATTGGAAGGAACTGACCTATTTGTATATCCAATATGATGAGTTCGATAATGCTGCAACCACCATCATGAACCATTCGCCTGAAGCATGGGATCACCTGCAGTTCAAAGATGTTATTGTCAAAGTTGCAAATGTGGAGTTGTATTACAAGGCTGTTCACTTCTATTTCCAAGAGCATCCCGATCTTATCAATGATGTTCTGAATGTCCTTGCACTTCCTGTTGATGACATCATGCGGAAGTCCATTGCCTTGTCAAAGAAGGATAACCTATACAAAGATGCCATGGAGACAGCCTCACAATCTGGCCAGCGTGAACTTGCTGAGGAGTTGCTTATTTATTTCATTGATCAGAACATGTATGCTCAATTGCTACCTCTTGCTTTGCCTGCACCACCAATGCCTGGAATGATTGTAGCAGTGAAGATTTTGACAATCGCGAAACTTCACTTGCCAGTGACAATTAATTAA 729 0.3868 MKYHLTKISRQIKVCNKVFEDVELQFKRLLEENKKISAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNNENWKELTYLYIQYDEFDNAATTIMNHSPEAWDHLQFKDVIVKVANVELYYKAVHFYFQEHPDLINDVLNVLALPVDDIMRKSIALSKKDNLYKDAMETASQSGQRELAEELLIYFIDQNMYAQLLPLALPAPPMPGMIVAVKILTIAKLHLPVTIN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g01102 242 Coils Coil 19 39 - -
Adu10g01102 242 ProSiteProfiles Clathrin heavy-chain (CHCR) repeat profile. 1 151 IPR000547 GO:0006886|GO:0016192
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN RELATED 33 86 - -
Adu10g01102 242 Gene3D Tetratricopeptide repeat domain 25 85 IPR011990 GO:0005515
Adu10g01102 242 Gene3D Tetratricopeptide repeat domain 86 213 IPR011990 GO:0005515
Adu10g01102 242 Pfam Region in Clathrin and VPS 83 148 IPR000547 GO:0006886|GO:0016192
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN RELATED 166 204 - -
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN RELATED 87 167 - -
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 33 86 - -
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 87 167 - -
Adu10g01102 242 PANTHER CLATHRIN HEAVY CHAIN 1-RELATED 166 204 - -
Adu10g01102 242 SUPERFAMILY ARM repeat 37 160 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g01102 Adu-Chr10 21829389 21832540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g01102 K04646 - adu:110276793 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g01102 10 21829389 21832540 Adu07g00768 07 9070113 9081575 ECH
Adu10g01102 10 21829389 21832540 Adu10g01102 10 21829389 21832540 ECH
Adu10g01102 10 21829389 21832540 Adu07g00768 07 9070113 9081575 PCT