Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00942 ATGGATCCCCGCGAAGACATCAACAAACCGATAGTACTCATCACGGGGTGCTCCGAGGGAGGCATAGGCCACGCGCTTGCACGCGCCTTCGCAGCCAACAAGTGCGCTGTCGTCGCCACCAGCAGGTCGCGCTCCACCATGGCGGACCTTGAGCACGACACCCGCTTCTTCCTTCAGGAGCTCGACGTCAAGTCCGACGACAGCGTCCGCCGTGCTCTCGACGCCGTCATTGCCCACTTCGGCCGTGTCGACGTTCTTGTCAACAATGCCGGCGTTCAGTGTGTGGGCCCTCTTCCCGAGGTTCCTCTCTCTGCGATTCAGAGCACCTACGAAACCAACGTCTTCGGTGCCTTGAGGATGATTCAGGCTGTTGTTCCTCATATGGCAAAGAGGAAACAGGGTAAGATTGTGAATGTTGGAAGCGTTACGGCTATGGCATCTGGACCTTGGTCTGGCGCATATACTTCGTCCAAAGCTGCCCTTCATTCTTTGACAGATACCCTAAGATTGGAACTTAGCCATTTTGGAATTGATGTTGTCAATGTTGTCCCTGGAGCTATCAAGTCAAATATTGGAAATTCTGCCATAGCTAGCTACGACCACATGCCTGAGTGGGACTTATTCAAGCCTTTTGAAGCCGCAATTCGAGATAGAGCTTATTTTTCTCAGAAAACAAAGTCAACCCCCAATGATGAGTTTGCGAAACACACCGTGGCCGCTATCCTGAAGAAGAAGCCACCAGCGTGGTTCTCCTACGGCCATTACTCTACCGCAATGGCCATCATGTACCATTTGCCGCTGTGTGTTAGGGACTTTATTTTGAAGAAAGCGATGAAATGCTGA 843 0.5196 MDPREDINKPIVLITGCSEGGIGHALARAFAANKCAVVATSRSRSTMADLEHDTRFFLQELDVKSDDSVRRALDAVIAHFGRVDVLVNNAGVQCVGPLPEVPLSAIQSTYETNVFGALRMIQAVVPHMAKRKQGKIVNVGSVTAMASGPWSGAYTSSKAALHSLTDTLRLELSHFGIDVVNVVPGAIKSNIGNSAIASYDHMPEWDLFKPFEAAIRDRAYFSQKTKSTPNDEFAKHTVAAILKKKPPAWFSYGHYSTAMAIMYHLPLCVRDFILKKAMKC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00942 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 IPR002347 -
Adu10g00942 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 IPR002347 -
Adu10g00942 280 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 IPR002347 -
Adu10g00942 280 PANTHER BNAC02G00550D PROTEIN 8 278 - -
Adu10g00942 280 CDD 17beta-HSD-like_SDR_c 11 256 - -
Adu10g00942 280 Gene3D - 10 268 - -
Adu10g00942 280 PRINTS Glucose/ribitol dehydrogenase family signature 81 92 IPR002347 -
Adu10g00942 280 PRINTS Glucose/ribitol dehydrogenase family signature 128 144 IPR002347 -
Adu10g00942 280 PRINTS Glucose/ribitol dehydrogenase family signature 154 173 IPR002347 -
Adu10g00942 280 PRINTS Glucose/ribitol dehydrogenase family signature 12 29 IPR002347 -
Adu10g00942 280 PRINTS Glucose/ribitol dehydrogenase family signature 175 192 IPR002347 -
Adu10g00942 280 Pfam short chain dehydrogenase 11 194 IPR002347 -
Adu10g00942 280 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 10 270 IPR036291 -
Adu10g00942 280 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 141 169 IPR020904 GO:0016491
Adu10g00942 280 PANTHER NADPH-DEPENDENT 1-ACYLDIHYDROXYACETONE PHOSPHATE REDUCTASE 8 278 - -
Adu10g00942 280 SMART This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00942 Adu-Chr10 15586677 15589011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00942 1 191 Acyl Lipid Metabolism Gene Families AT1G62610 28.922 1.93e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00942 - - gmx:100789660 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00942 10 15586677 15589011 Adu10g00942 10 15586677 15589011 ECH