Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00940 ATGACTAATTCCTCAGGAAAGAAAAGTAAGAAAAGAAGAAGAAGAAGCAGCAGCAGCAGTCCTACTTGGGAACGGAAAAAAAGTGAAACGAGTGCAAGAAGAGTAAATAAGACAGTGTGCGCATTCGCCATCATTGTTGAGGCAGGGATTTGTGAACTGAAAGAGGAGCTGAAGAGGAGGAGATTAACCACCAAGGGTTTGAAGGACGAGTTGGTGAGGCGATTGGACGAAGCTCTTCGTGCTGAGATGGAGGCTGATGAGACTGCCTCGAAGGATGATGCAAACGGTTTTGAGGTCCATGCGGGTGGTGGCAGTGAAGATTCGCAAACGGTTGCTGCAGATGTTGAAGTGGTTCAAACAATTGAAGAGGAAAGTGTCCAAACCATGGAAAAGGGGAATAATGATAATGTTGAGCCAACTCAAGAAGTTGAGACTGTGGAGAAGGGGAATACTGTTGTAGTTGAGCCAATTGATACAGAGAGCACAGAGAAAGTTCAGGAGGATGTGGATGACGACAGCAAGAAGAATGACAAGCAGGGTGGTGTTGCCAACCCAGTTGACATTAACAGTAGTGTGTCAGCTGTGGATGAAGATATCGAACAAGCTGGTTTGCCAGCCGGTGTAGATCCTGAAAATGTGAAAGATGAGCAAAGTGCTCATGGCTCTACTGTGGAGACATCCGATAAAATCACGGAGACTGTATCAACTGAAGTAGTGGTCAGTGATCAGCATACTCATAGTGAAGTAAAGAGTAACAATGATTCGACAATCAAGGTGGAGAATGAGGAATCAAAGGCGCAGCTGGACAATGAGGTCCCAAAGCCCCAACTGGAGTGTGACACAAAGCCCCAACTGGAGTGTGACACAAAGCCCCCGTCTGAGGATCTCATGCCCAACACTTCTGTTCCAGAAAACCAGAACAAGATATTGTTAGGCCGGAGATGGTGGAAGAACCATCATCCAGAAAAGATCAATAATGTTACGACTCCAGACTTGAACAAGATCAATAGCAATGATGATGTGGGGTATCCAGAAAAGTTAAACCTAGATAGAAGTTCTGGTGATGATTCCATGGAAGAGGATTTACCTGAGAGTAAACATGTTGATTCTAAGTTTGATGTTGATGAAAGAGACAATGTGGAGAATATTGAGGTGTCCATTGTGAAGGAGGAAAGTAAAACTATAGTCGCGAAGAATGATCTATCTGCAGGGAAAACTGATACTCATCAGGACATTGACATTAGTCCTGTTGCCTTGGCTGAGAAACGAAAATTTAATGAGCAAGTTTCAGTTGGGAGCAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACCGAAACAGTTAAAGGGCCAGATCTGAAAAGCACTGTTCCCAGAGCTGCAACTACACCAAAGGACGAGCCAGTTGCGCTGAAACGCAACTTCTCTAGGTCTGATTCAACTGTAACTGATGATGCACCTAAAGAACGCATTGTTCCACCATCACAAAAGCCCCCAACTAATTCCCTCCGAATCGATCGTTTCCTCCGTCCTTTTACCCTAAAACAAGTGCAAGAGCTTCTTGGTAAAAGTGGGAGTATCACTAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCATCAGTTGAAGAAGCTATTGAGACCAGAAATGCTGTGTATAATTTGCAATGGCCTCCAAATGGTGGGCGGCTCTTAGTTGCCGAGTTTGTTGATCCTCAGGAGGTGAAAATGAAGTTAGAACCTCCTCCTCCTCCTCCTCCTGCAGCCGCCCCTGTCAGCAGTGGTCCAGCAGTTCTTCCTACACCACCATCCTCACAACCAGAGCCTTCCCCCCGTATGCGCAGGGAGCAACCTCCAGCTCCAGCTACTCTCCCACCTCCACCTCCATTGTCGAAGCTCCCACCAGCGGCAAGGGAACGGCTTCCGTCCCCACCGCCCCTTCCAGAGAAGGTTGACCCACCTATTCTCACGTTGGATGATCTCTTCCGCAAAACCACAGCAACTCCTCGCATCTACTATTTACCTTTGTCTGAAGAGCAAGTATCTGCTAGACTTGCAGCTTGCAGTAAAAGCACTCGGATGTTGCTGCACAGAGATGAGTCATCATTAGGCCCCAAGTGA 2133 0.466 MTNSSGKKSKKRRRRSSSSSPTWERKKSETSARRVNKTVCAFAIIVEAGICELKEELKRRRLTTKGLKDELVRRLDEALRAEMEADETASKDDANGFEVHAGGGSEDSQTVAADVEVVQTIEEESVQTMEKGNNDNVEPTQEVETVEKGNTVVVEPIDTESTEKVQEDVDDDSKKNDKQGGVANPVDINSSVSAVDEDIEQAGLPAGVDPENVKDEQSAHGSTVETSDKITETVSTEVVVSDQHTHSEVKSNNDSTIKVENEESKAQLDNEVPKPQLECDTKPQLECDTKPPSEDLMPNTSVPENQNKILLGRRWWKNHHPEKINNVTTPDLNKINSNDDVGYPEKLNLDRSSGDDSMEEDLPESKHVDSKFDVDERDNVENIEVSIVKEESKTIVAKNDLSAGKTDTHQDIDISPVALAEKRKFNEQVSVGSNEPAKRQRRWNTETVKGPDLKSTVPRAATTPKDEPVALKRNFSRSDSTVTDDAPKERIVPPSQKPPTNSLRIDRFLRPFTLKQVQELLGKSGSITSFWMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEFVDPQEVKMKLEPPPPPPPAAAPVSSGPAVLPTPPSSQPEPSPRMRREQPPAPATLPPPPPLSKLPPAARERLPSPPPLPEKVDPPILTLDDLFRKTTATPRIYYLPLSEEQVSARLAACSKSTRMLLHRDESSLGPK 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00940 710 MobiDBLite consensus disorder prediction 125 304 - -
Adu10g00940 710 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 325 695 - -
Adu10g00940 710 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 50 307 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 470 486 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 125 147 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 327 368 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 1 16 - -
Adu10g00940 710 Gene3D SAP domain 50 90 IPR036361 -
Adu10g00940 710 CDD RRM_ACINU 500 584 IPR034257 -
Adu10g00940 710 MobiDBLite consensus disorder prediction 1 33 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 83 111 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 223 242 - -
Adu10g00940 710 Pfam RNSP1-SAP18 binding (RSB) motif 653 694 IPR032552 -
Adu10g00940 710 MobiDBLite consensus disorder prediction 243 269 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 344 368 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 581 656 - -
Adu10g00940 710 SMART sap_9 46 79 IPR003034 -
Adu10g00940 710 MobiDBLite consensus disorder prediction 580 659 - -
Adu10g00940 710 ProSiteProfiles SAP motif profile. 45 79 IPR003034 -
Adu10g00940 710 SUPERFAMILY SAP domain 50 81 IPR036361 -
Adu10g00940 710 MobiDBLite consensus disorder prediction 17 33 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 428 501 - -
Adu10g00940 710 MobiDBLite consensus disorder prediction 160 178 - -
Adu10g00940 710 SUPERFAMILY RNA-binding domain, RBD 493 582 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00940 Adu-Chr10 15524595 15531699 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00940 K12875 - gmx:100786288 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00940 10 15524595 15531699 Adu10g00940 10 15524595 15531699 ECH