Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00882 ATGAGAGACACTTCACCAGAAAGCAGAGGTTGTGGTTTGCTATCATCATTGCTTCGCAGGCGCGGCTCATCTAGGAGCAAAACTGAAAGATATTCTGGTAATGATGATGCTCATAATCATGGGAAGCAACCATCAAAAGCCAAAGATTCAAAACGGCCCCGGAGTGATGTCTCCGATGATGCCCGAAGATCTGCTTCTTCTGCATCAAGCAATTCCAACACTCCCCAAAGGCAAAAGCATGTAGTTGTAAGTGTAAACCAAAACCACCAAAGGAAACAACAACAACATGATGAGGCAGCAGCAGCATCAATGGCAGTGTGTTCGTCATCTAGGTCGTCAAAGGTGTCACCTGTACAAGGATATGTCAATCAAGGAAGAAAGGTTCCAAAAGATGCCGTTGGAATATCCGGTGAGCTTGATAGCATGTTAAACGATTACCAGAAGCCGAAGGGAAGCAACAAGCTTGTTCGAGCTTCTAGCAATGTGATGATATATGGTAACTTAGGTAACCTTGGACAAGGAGGAGGAGGAACAAATTATCCTAGTTCAAACATTCCAATGGATAAAGTGGAAAATGGTGGTGGTAGTAACAATAATAGGAATAAAAAGGTTACTAGGAATAGTAAAGAAGAATCAGGTTCACTTTGTAGGGCTGTGTCTACTAGAATGGACCCTGAACAGTTGAAGATAATGGGGAATGAGGATTATAAGAATGGGAACTTTGCTGAGGCATTGGCTCTGTATGATGCAGCAATTGCAATTGATCCTAATAAGGCTGCTTATAGAAGCAATAAAAGTGCAGCATTAACAGCTCTTGGAAGGCTTTTGGAGGCTGTGTTTGAATGTAGAGAAGCCATTCGGATTGATCAGCATTACCAAAGAGCTCATCAACGATTGGGAAACTTGTACTTTAGACTAGGAGACCCAGAAAAGGCATTGTATCATTATAAACAAGCAGGACCAGAGGCTGATCCTGATGAGATTGCTAAAGTGAAGATTCTTCAGGTTCATCTAAACAAGTGCACGGAGGCTCGCAGGGTGGGTGATTGCAACACACTAATCACTGAAACTAACAAGGTTATATCATCTGGTGCAGATTCTGCTCAACAGATATTTGCATTACAAGCAGAAGCACTCTTAAAGCTTCGTAGACATCAAGATGCAGAAAAAATAATGTCAAAGTGCCCGAAATTTGATGTTGATGAGTGTACTAGGTTCTTTGGACCTATATGCAATGCAAATTTGTTGGTGACACGTGCCCAAGTCGATATAGCAGCTGGGAGATTTGAAGATGCTTTAGAAGCAGCACAGAAAGCAGTTAGTTTGGATCCCAATAATAGGGAGGCCAATATGGTTATGAGAAAGGCTCGAGATGTCAGCGCTGCTCGATCAAAGGGAAACGAGCTTTTCAAGGCATCAAGGTTCTCTGAGGCCTGTGCCGCATATGGAGAGGGACTTGAACGTGATCCATATAACTCTGTTTTACTATGCAACAGTGCTGCATGCAGATCAAAACTAGGCCAACATGAGAAAGCTGTGGAAGATTGCACTCTTGCACTTAACTTGCGCCCATCTTATGCCAAGGCTAGGTTGAGAAGAGCTGATTGCAATGCCAAGTTGGAAAGGTGGGAAGCTTCCATACAAGACTATGAAATTTTGTTAAAAGAGACACCAGATGATGAACAAGTAAAACGGGCATTGCTGGAGGCCCAAGAAAAGCTAAAGACGCAAAGAGGTGGATAA 1743 0.4286 MRDTSPESRGCGLLSSLLRRRGSSRSKTERYSGNDDAHNHGKQPSKAKDSKRPRSDVSDDARRSASSASSNSNTPQRQKHVVVSVNQNHQRKQQQHDEAAAASMAVCSSSRSSKVSPVQGYVNQGRKVPKDAVGISGELDSMLNDYQKPKGSNKLVRASSNVMIYGNLGNLGQGGGGTNYPSSNIPMDKVENGGGSNNNRNKKVTRNSKEESGSLCRAVSTRMDPEQLKIMGNEDYKNGNFAEALALYDAAIAIDPNKAAYRSNKSAALTALGRLLEAVFECREAIRIDQHYQRAHQRLGNLYFRLGDPEKALYHYKQAGPEADPDEIAKVKILQVHLNKCTEARRVGDCNTLITETNKVISSGADSAQQIFALQAEALLKLRRHQDAEKIMSKCPKFDVDECTRFFGPICNANLLVTRAQVDIAAGRFEDALEAAQKAVSLDPNNREANMVMRKARDVSAARSKGNELFKASRFSEACAAYGEGLERDPYNSVLLCNSAACRSKLGQHEKAVEDCTLALNLRPSYAKARLRRADCNAKLERWEASIQDYEILLKETPDDEQVKRALLEAQEKLKTQRGG 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00882 580 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 6 578 IPR044534 -
Adu10g00882 580 Pfam Tetratricopeptide repeat 232 289 - -
Adu10g00882 580 Pfam Tetratricopeptide repeat 507 560 - -
Adu10g00882 580 MobiDBLite consensus disorder prediction 105 120 - -
Adu10g00882 580 Coils Coil 533 553 - -
Adu10g00882 580 MobiDBLite consensus disorder prediction 1 120 - -
Adu10g00882 580 Gene3D Tetratricopeptide repeat domain 223 578 IPR011990 GO:0005515
Adu10g00882 580 MobiDBLite consensus disorder prediction 180 202 - -
Adu10g00882 580 SUPERFAMILY TPR-like 458 575 IPR011990 GO:0005515
Adu10g00882 580 MobiDBLite consensus disorder prediction 180 217 - -
Adu10g00882 580 MobiDBLite consensus disorder prediction 62 90 - -
Adu10g00882 580 ProSiteProfiles TPR repeat profile. 413 446 IPR019734 GO:0005515
Adu10g00882 580 SUPERFAMILY TPR-like 225 449 IPR011990 GO:0005515
Adu10g00882 580 MobiDBLite consensus disorder prediction 22 61 - -
Adu10g00882 580 Pfam Tetratricopeptide repeat 294 319 IPR013105 -
Adu10g00882 580 Pfam Tetratricopeptide repeat 414 446 IPR013105 -
Adu10g00882 580 ProSiteProfiles TPR repeat profile. 225 258 IPR019734 GO:0005515
Adu10g00882 580 PANTHER OS01G0616333 PROTEIN 6 578 - -
Adu10g00882 580 SMART tpr_5 293 326 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 413 446 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 459 492 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 527 560 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 493 526 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 259 292 IPR019734 GO:0005515
Adu10g00882 580 SMART tpr_5 225 258 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00882 Adu-Chr10 13197458 13201169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00882 273 572 Glycosyltransferase AT3G04240 22.671 7.45e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00882 - - gmx:100811282 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00882 10 13197458 13201169 Adu10g00882 10 13197458 13201169 ECH