Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00639 ATGGACTTGTCTCATCCCCACTCCAATTTGTCGCTCGGCTTCTCATCCTCTCACGCGTCGCCGCCACGCCGCCCTCCAATCCCCGACGAATCTATCACCCTCCAGCTCGAATCCAGCCTCCGTGACCCTTCCCACCCTCTCCCTCCGGTTCCCCTCCAGCTCCTCGAGCCCCAAACAGCCACCGATAACGGCAACCACGATTCCGAGTTCAACGACGCCGCCGACGATGAAGACGACAGGGACGTCGAGGAATTTCGCATCCTAGGCCACTCAATGTGCCTCAAGAGGCGAAGAGATTGCGATTCCTCATCCTCTTCCTCAATCTCTTCCTCCAAGAGGGTTTCCGTTTCCCACGAATCTGATCTCGAGGCACGGCGAGCTTTGGTTCGCTCATGGGGGAACCAATCCTTGCAGCTTGCGGACCCCGACGTCTTCGACATAATGGAGAAGGAGAAGAGAAGGCAGTACAGAGGGATTGAATTGATCGCCTCCGAGAATTTCGTATGCAAAGCCGTTATGGAAGCTCTTGGGAGCCATTTGACTAACAAGTACTCCGAGGGAATGCCCGGTGCACGTTACTATGGAGGTAACCAATATATCGATGAGATTGAAACCTTGTGTTGTGAGCGTGCTTTGCTTGCGTTTAATCTTGACCCCAAGTGTTGGGGTGTCAATGTTCAGCCATATTCGTGTACCTCTGCGAATTTTGCAGTTTACACCGGGTTGCTATTGCCCGGTGATCGTATCATGGGGTTGGATACACCCTCTGGAGGGAACACTAGCCATGGTTACTATACTCCCAATGGGAAGAAAGTTTCCGGTGCCTCCATTTTCTTTGAGAGCTTGCCTTATAAGGTGAACCCACAAACTGGGTATGTTGATTATGAGAAGCTTGAGGAGAGGGCGCTTGATTTTCGTCCCAAGATACTTATTTGCGGTGGGAGTTCGTACCCTCGAGAATGGGATTACGCAAGGTTTAGGCACATTGCGGATAAATGCGGAGCTGTTTTGATGTGTGATATGGCACAAATAAGTGGGCTAATCGCAGCCAAGGAATGTTCAAACCCTTTTGACTATTGTGATATTGTTACTTCAACAACTCACAAGAGTCTTCGCGGTCCAAGGGGAGGCATAATTTTTTATCGGAAGGGTGCAAAACCAAGGAAGAGAGGGATTCTGTTAAGTCAGGGAAATGAAAGTGATCAGTATGACTTTGAGGAAAAGATAAATTTTGCTGTTTTTCCATCGTTGCAAGGGGGCCCACACAATAACCATATTGCTGCTCTTGCTATAGCTTTAAAACAAGTGGCTACTCCTGAGTATAAGGCATACATGCATCAAGTGAAGAAAAATGCTCAGGCCTTAGCATCTGCTTTATTGAGAAGGAAATGCCGCCTAGTAACTGGGGGTACAGACAACCACTTAGTGCTTTGGGATTTAAGGCCTCTTGGATTGACAGGTAAATTTTATGAGAAGGTCTGTGAGGCATGTCATATTACTTTGAATAAGATTGCAATTTTTGGTGACAATGGAGTTATTATTCCCGGAGGTGTAAGAATAGGTACCCCTGCCATGACTTCAAGAGGATGTTTAGAAGCTGATTTTGAGACAATGGCTGAATTTCTGTTTAGAGCCGCGCAACTTGCAAACGTATTGCAGAGGGAGCATGGGAAAATGCAGAAGACTGTTTTGAAGGGGCTTGATAGCAGTAGGGAGGTTGTTGATCTCCGGGCTCGGGTTGAAGCTTTTGCAACTCAATTTGCAATGCCTGGTTTTGACATTTGA 1785 0.4779 MDLSHPHSNLSLGFSSSHASPPRRPPIPDESITLQLESSLRDPSHPLPPVPLQLLEPQTATDNGNHDSEFNDAADDEDDRDVEEFRILGHSMCLKRRRDCDSSSSSSISSSKRVSVSHESDLEARRALVRSWGNQSLQLADPDVFDIMEKEKRRQYRGIELIASENFVCKAVMEALGSHLTNKYSEGMPGARYYGGNQYIDEIETLCCERALLAFNLDPKCWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDTPSGGNTSHGYYTPNGKKVSGASIFFESLPYKVNPQTGYVDYEKLEERALDFRPKILICGGSSYPREWDYARFRHIADKCGAVLMCDMAQISGLIAAKECSNPFDYCDIVTSTTHKSLRGPRGGIIFYRKGAKPRKRGILLSQGNESDQYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMHQVKKNAQALASALLRRKCRLVTGGTDNHLVLWDLRPLGLTGKFYEKVCEACHITLNKIAIFGDNGVIIPGGVRIGTPAMTSRGCLEADFETMAEFLFRAAQLANVLQREHGKMQKTVLKGLDSSREVVDLRARVEAFATQFAMPGFDI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00639 594 Gene3D - 166 446 IPR015421 GO:0003824
Adu10g00639 594 Gene3D Aspartate Aminotransferase, domain 1 141 590 IPR015422 GO:0003824
Adu10g00639 594 ProSitePatterns Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 361 377 IPR019798 GO:0030170
Adu10g00639 594 CDD SHMT 141 583 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Adu10g00639 594 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 82 594 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Adu10g00639 594 Hamap Serine hydroxymethyltransferase [glyA]. 136 591 IPR001085 GO:0004372|GO:0019264|GO:0030170|GO:0035999
Adu10g00639 594 MobiDBLite consensus disorder prediction 1 79 - -
Adu10g00639 594 SUPERFAMILY PLP-dependent transferases 129 593 IPR015424 -
Adu10g00639 594 PANTHER SERINE HYDROXYMETHYLTRANSFERASE 82 594 - -
Adu10g00639 594 MobiDBLite consensus disorder prediction 1 18 - -
Adu10g00639 594 Pfam Serine hydroxymethyltransferase 138 541 IPR039429 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00639 Adu-Chr10 7201637 7204745 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00639 K00600 - gmx:100810926 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00639 10 7201637 7204745 Adu10g00639 10 7201637 7204745 ECH