Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00438 ATGTGTTTTGCCCAAAATACCCCTGAAGACTTCCTTTCAGTTCACAATGAGGCTCGTGAAGAGGTTGGTGTGGGTCCACTCTCATGGAACCACACACTTGAAGCCTACGCTCAGCGCTACGCCAACGAGAGGATCCCGGACTGCAACCTGGAACACTCGATGGGGCCTTACGGCGAGAACATCGCCGAAGGCTACGGCGACATGAAGGGGTCCGACGCCGTGAAGTTTTGGCTGACGGAGAAGCCAAACTATGACTACCACTCAAACTCATGCGTTAACGATGAGTGCCTGCATTACACTCAGATAGTGTGGCGTGATTCGGTTCATGTTGGctccggcgagcaacaccccgatgcaacccagcagcggctaagttctgtgccgctgcgacaccatcactgctcccgttcttctttctctccttcatcaacacagGCCATGCAACTGTCAGATGTTATTGAGGTTGGAAGTGAAGAGACGGATCTTGGTTATGAGGTTTGGACTCTAGAGGTCGGTGCTCATATTGGCTGCAATGAGCCCCACCAATTTGATGGGTTCATGTATTTGTTAAACTCATTCGACAATAGTTAA 591 0.4112 MCFAQNTPEDFLSVHNEAREEVGVGPLSWNHTLEAYAQRYANERIPDCNLEHSMGPYGENIAEGYGDMKGSDAVKFWLTEKPNYDYHSNSCVNDECLHYTQIVWRDSVHVGSGEQHPDATQQRLSSVPLRHHHCSRSSFSPSSTQAMQLSDVIEVGSEETDLGYEVWTLEVGAHIGCNEPHQFDGFMYLLNSFDNS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00438 196 PANTHER - 4 113 - -
Adu10g00438 196 PRINTS Allergen V5/Tpx-1 family signature 27 45 IPR001283 -
Adu10g00438 196 PRINTS Allergen V5/Tpx-1 family signature 96 112 IPR001283 -
Adu10g00438 196 PRINTS Allergen V5/Tpx-1 family signature 73 86 IPR001283 -
Adu10g00438 196 SMART SCP_3 6 121 IPR014044 -
Adu10g00438 196 Pfam Cysteine-rich secretory protein family 12 112 IPR014044 -
Adu10g00438 196 CDD CAP_PR-1 8 111 - -
Adu10g00438 196 SUPERFAMILY PR-1-like 4 114 IPR035940 -
Adu10g00438 196 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 4 113 IPR001283 -
Adu10g00438 196 Gene3D CAP 6 127 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00438 Adu-Chr10 5093706 5097487 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00438 K13449 - gmx:100527778 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00438 10 5093706 5097487 Adu10g00438 10 5093706 5097487 ECH