Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00363 ATGGGATCGAAGAGGAACACGGTGGTTTTCGAGGACTACTTCCCGGCAATGGTGGAGAAACTGGGGACTGAAGGGTTCATGAAGGAGCTGACAAATGGGTTCCAGTTGTTGATGGACAGAGAGAAGAAAGTGATCACATTTGAGAGCCTCAAGAGGAACTCTGCATTGCTTGGGTTGGAAGGGATGAGTGATGATGAGATAATGAGCATGCTGAGAGAAGGTGATCTTGATGGAGATGGTGCTCTTGATGAGATGGAGTTCTGCACGCTCATGTTCAGGTTGAGCCCTGCTTTGATGAATAACTCTAAGCAACTTTTGGAGGAAGCCATTTTTAGTGCTCATTAG 345 0.4667 MGSKRNTVVFEDYFPAMVEKLGTEGFMKELTNGFQLLMDREKKVITFESLKRNSALLGLEGMSDDEIMSMLREGDLDGDGALDEMEFCTLMFRLSPALMNNSKQLLEEAIFSAH 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00363 114 SMART efh_1 66 94 IPR002048 GO:0005509
Adu10g00363 114 SUPERFAMILY EF-hand 23 100 IPR011992 -
Adu10g00363 114 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Adu10g00363 114 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Adu10g00363 114 PANTHER CALCIUM-BINDING PROTEIN KIC 1 112 IPR044205 GO:0005509
Adu10g00363 114 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Adu10g00363 114 Gene3D - 8 114 - -
Adu10g00363 114 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00363 Adu-Chr10 4167124 4167713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00363 10 110 EF-hand Containing Proteins AT4G27280 58.824 6.09e-38 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00363 K24345 - gmx:100306210 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00363 10 4167124 4167713 Adu10g00363 10 4167124 4167713 ECH