Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00324 ATGTCTTTATATTGTTCAAGCTTGGGTACCATTATCCCACGTATCTTGGGACAAGCAAGGAAGAGATACCATGATGTTTTTTCTGCTTTCACACTCACCTATGTTGTTGGAGGAGTAGGTTCTACTTCTACTTCTACCTTAACTTCACTTCACTATAAAGCACAACCCCATAATTACATTGGCTGTGTCTCAAAATTCGACCGTACTTGTTCTTTTCCTGTCATGGAGGAGAAGAATCAGAGTAACAACTTGAGATTATTGTATGAACAAGAAGAACAACCGAAGGAATATTCCAAGGAACTTGATGTTGCTGTGAGAGCAGTGCAGATGGCATGTTCACTCTGTCAGACAGTTCAAGACACTTTGATTTCTAGAACCAACCATCAGGTCCACTCCAAAGATGATAATTCTCCTGTTACTGTTGCAGATTGGAGTGTGCAAGCAATTGTCAGCTGGATATTGTCGGAGTGTTTGGGGAGTGAAAATATCTCAATTGTAGCCGAAGAGGACGTTCAAACTCTGTCCAAGGCTAATGCATCAGAGCTGTTAGAAGCTGTGGTTGAAACTGTGAATGAATGTCTAAGCAAAGCATCCCAATTTGGAGTTCAAAAGCCAAAGTCAGCTCTTGGCACTTCAGAAGTTCTAGAAATAATTAGTCGCTGCAACTCGAGAGGCGGTGCTAATGGAAGATTTTGGGTGCTTGATCCTGTTGATGGCACATTGGGGTTTGTAAGAGGAGATCAGTATGCTGTAGCTCTAGCACTGATAGAAGATGGAGAGGTTGTTCTTGGAGTTCTTGGTTGTCCAAACTATCCAATGAGAAAGGAGTGGTTAAGCTATCAGCACCGTTATCATAGGATCATATCTAAGTTGACTCCTCCAAATTCTGAAACTTGGAACAAAGGTTGTGTGCTGTATGCAAAAAAAGGTAGTGGCAAGGCATGGATGCAACCTCTGCTTCATGGCAATAATAAGTTCTTGTGGCCAAACAATGCAAAACAAGTTTGTGTGTCTTCCATTGACAATCCAGCACTGGCTACATTTTGTGAACCGGTTGAGAAGGCCAATTCAAGCCACTCTTTCACTGCAGGACTAGCTCATAGTGTTGGTCTAAGGAAACAGCCATTGAGAGTTTACAGCATGGTGAAATATGCAGCAATAGCGCGTGGAGATGCTGAAGTATTCATGAAGTTTGCAAGGAGTGGTTACAAGGAGAAGATATGGGACCATGCTGCAGGTGTTATCATCATACAGGAGGCGGGTGGCATGGTGACTGATGCCGGCGGACGGCCGCTAGATTTCTCAAAAGGTATATATTTAGAAGGGCTTGATCGTGGTATAGTTGCTTGTTCTGGAACCACACTCCATGAAAAGATCATTGAAGCTGTTGATGCTAGCTGGGGCTCTTCTAGCCTTTGA 1419 0.4313 MSLYCSSLGTIIPRILGQARKRYHDVFSAFTLTYVVGGVGSTSTSTLTSLHYKAQPHNYIGCVSKFDRTCSFPVMEEKNQSNNLRLLYEQEEQPKEYSKELDVAVRAVQMACSLCQTVQDTLISRTNHQVHSKDDNSPVTVADWSVQAIVSWILSECLGSENISIVAEEDVQTLSKANASELLEAVVETVNECLSKASQFGVQKPKSALGTSEVLEIISRCNSRGGANGRFWVLDPVDGTLGFVRGDQYAVALALIEDGEVVLGVLGCPNYPMRKEWLSYQHRYHRIISKLTPPNSETWNKGCVLYAKKGSGKAWMQPLLHGNNKFLWPNNAKQVCVSSIDNPALATFCEPVEKANSSHSFTAGLAHSVGLRKQPLRVYSMVKYAAIARGDAEVFMKFARSGYKEKIWDHAAGVIIIQEAGGMVTDAGGRPLDFSKGIYLEGLDRGIVACSGTTLHEKIIEAVDASWGSSSL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00324 472 ProSitePatterns Inositol monophosphatase family signature 1. 232 245 IPR020583 -
Adu10g00324 472 PRINTS Inositol monophosphatase superfamily signature 232 248 IPR000760 GO:0046855
Adu10g00324 472 PRINTS Inositol monophosphatase superfamily signature 405 429 IPR000760 GO:0046855
Adu10g00324 472 Gene3D - 336 466 - -
Adu10g00324 472 Pfam Inositol monophosphatase family 135 466 IPR000760 GO:0046855
Adu10g00324 472 SUPERFAMILY Carbohydrate phosphatase 97 465 - -
Adu10g00324 472 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 97 471 IPR006239 GO:0006790|GO:0008441
Adu10g00324 472 CDD PAP_phosphatase 100 463 - -
Adu10g00324 472 Gene3D - 95 326 - -
Adu10g00324 472 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 78 472 - -
Adu10g00324 472 ProSitePatterns Inositol monophosphatase family signature 2. 408 422 IPR020550 GO:0046854
Adu10g00324 472 PANTHER PHOSPHATASE 78 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00324 Adu-Chr10 3824915 3828108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00324 K01082 - gmx:100776247 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00324 10 3824915 3828108 Adu10g00324 10 3824915 3828108 ECH
Adu03g03347 03 120258790 120261156 Adu10g00324 10 3824915 3828108 PCT