Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g00105 ATGGAGGGCAATAATTTAGATTCTAAGAATCAGGTTGAGGATGTAGAAACTTTATCTAAAAGGGTGTCGGGTTTTTCAGTTAGTGACCAGATATCCAATTCCAATTCTTTTAAGGATGATGAGGTGGATGGTAATAGGACAAATCATGTTAACAAAGAGTATTACGACTCTTTTTCCCCATCTGGCATTGAAGGTGATAGCATGAATTCATCCAGATTATATCCTGAATTATATGAGAAAACTTTGGAGAGAAGTGAAGACAAAAATGAACCTTCATCGGGTAATTTTCAGAAACGTGGAAAGTTCTTCTATTATGACACTCCACTGTGCGAAGATACTGGTGTTTGGATCCCGGTTTCCGTTCCTCCTATGTTGGAAGATGAGCACAAAGAGTGGGCCAAAGGTTTTCACTCAAATGGTGGCTACTTTCCTGATGATGACATGGGATGGAATCAATGCCTTGGAGAAGAAAGAGAATTGACTATGTGGGATGTTCTAGCAGAAATGTTACTTGCAGCTAGGGGAAAAGTGAATTCTTTAGCATCAGGAGATCTTCAGACATGTAGCTTTTCATGGATATCCAACAATGTACTTGAACAATGTTGGAGAGAGATGGCACAAACTCTTACAGAGGCCAACTTTGGTAACGTGAAGGAATTACTTGAAGCAGAGCCCCCAAAGTGGTTGGCAGATAGTGCTGCTGCTTCTTGTATGTTGTGTAGCGTGAGGTTCCATCCCATCATGTGCACCCGACATCACTGCCGGTTTTGTGGAGGAATATTTTGTGGTGAATGTTCCAAAGGACGGAGCTTGTTGCCATCAAAGTTCCGAGTTTCTGACCCCCAAAGAGTCTGTGATGTTTGCTGTGTTCGACTCGAGTCTGTACAGCCTTATTTGATGGATCATGTAAGTAATGCTGCTCAGTTACCAACCCATGACTTGACAGACCTCAGCACTTTACGATCATGGGTTAACTTTCCTTGGGCACGGTCCATGGAGTATGAAATTTACAAAGCAACGAATACTATCAAAGCTTACAATCAGATAGGTTCTTTGAAGCCTGAGAAATCAATCCCAGAGTTCATTCTAAGGCAAGCAAAAGGCCTTGCAATTATCACTGTGGTCAAAGTAGGAATGATGGTTACATATAATATTGGAACAGGACTTGTGCTCGCACTTAGGGAAGATGGTTCATGGTCCCCACCATCGGCTATTTCCACATTTGGTGTGGGTTGGGGAGCTCAGGCTGGAGGAGAGTTAACCGACTTCATTATTGTTCTGAGAACAACGGAAGCTGTCAAGACATTTAGTGGTAATGCGCATGTTTCTCTTGGAGCTGGTTTGAGTGCTGCATTTGGCATTGTTGGAAGGTCAGCTGAAGCTGATGTTCGCGCTGGTGATGGTGGCTATGCGGCTTGTTATACCTACAGCTGCAGTAAAGGCGCATTTGTTGGGTGTTCACTTGAAAGCAGTATTGTGAGTACCCGTGCACAAGAAAATTCGCGATTCTATGGCAGCCAGTCCATAACTGCAACAGATATATTACTTGGCTCGTTGCCTAGACCACCTGCTGCTGCTATTCTCTACCGTGCTCTTGCAGATTTGTATTCAAAGATTAATGGTTAA 1626 0.4311 MEGNNLDSKNQVEDVETLSKRVSGFSVSDQISNSNSFKDDEVDGNRTNHVNKEYYDSFSPSGIEGDSMNSSRLYPELYEKTLERSEDKNEPSSGNFQKRGKFFYYDTPLCEDTGVWIPVSVPPMLEDEHKEWAKGFHSNGGYFPDDDMGWNQCLGEERELTMWDVLAEMLLAARGKVNSLASGDLQTCSFSWISNNVLEQCWREMAQTLTEANFGNVKELLEAEPPKWLADSAAASCMLCSVRFHPIMCTRHHCRFCGGIFCGECSKGRSLLPSKFRVSDPQRVCDVCCVRLESVQPYLMDHVSNAAQLPTHDLTDLSTLRSWVNFPWARSMEYEIYKATNTIKAYNQIGSLKPEKSIPEFILRQAKGLAIITVVKVGMMVTYNIGTGLVLALREDGSWSPPSAISTFGVGWGAQAGGELTDFIIVLRTTEAVKTFSGNAHVSLGAGLSAAFGIVGRSAEADVRAGDGGYAACYTYSCSKGAFVGCSLESSIVSTRAQENSRFYGSQSITATDILLGSLPRPPAAAILYRALADLYSKING 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g00105 541 CDD SYLF_FYVE 334 535 - -
Adu10g00105 541 SUPERFAMILY FYVE/PHD zinc finger 226 305 IPR011011 -
Adu10g00105 541 Pfam FYVE zinc finger 227 292 IPR000306 GO:0046872
Adu10g00105 541 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 303 IPR013083 -
Adu10g00105 541 PANTHER RING/FYVE/PHD-TYPE ZINC FINGER FAMILY PROTEIN 75 539 - -
Adu10g00105 541 SMART fyve_4 223 294 IPR000306 GO:0046872
Adu10g00105 541 MobiDBLite consensus disorder prediction 1 70 - -
Adu10g00105 541 Pfam Las17-binding protein actin regulator 409 533 IPR007461 -
Adu10g00105 541 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 231 293 IPR017455 -
Adu10g00105 541 PANTHER SH3YL1 PROTEIN 75 539 - -
Adu10g00105 541 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g00105 Adu-Chr10 1084505 1088195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g00105 228 311 EF-hand Containing Proteins AT3G14270 34.831 1.14e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g00105 K20523 - gmx:100813648 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g00105 10 1084505 1088195 Adu10g00105 10 1084505 1088195 ECH