Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03173 ATGACGTGGCAGAATGGTATAGCCTTGTTGGATAACCCCTGCGAACTTCGAAGCTCCAAGGAGAAGAAGAAGATGGTTGGTTCAAGTTTCGGTCACTTCCTTCTTCTCTCTTACACTCCTCCTTCGTCTCTCTCCACTCTCTTTCCCACTAAAACCTTAACCCTCAGCTCAAGCCCCTTCCGCTGCAAATGCTTCTTCAAAAACATGAAAGCCTCGGGGATTCGGCAGGTAGGATTGACTACTCTGCATGGACACAGGGTTGATGCAATGAAGAGCAGCATTGTCCTTAAGATGTTTCAAAGAGAAATGACAATCGAATCCCATAATACCCTTGTCACAAAGCAATCTGAGATGAATGACTTTACAACAGAGGATCTTGAAGATGGGGGATTGTTATCTAAATTGGTTTATACATTCTTGTTTGGGCAGACTTTATCAGTGGTTTCTCCTGGTCTTTCATATGCAAGTGACTCAATGAAGATGAATCAGATATATGAAGTTGGAGAGTTATTTGATTTAAGCATCCAACTATTATACTTGGTATCATTATTGGGTTTGCTAGGGGTTGGGACTTACTTTGTGATTCGCCAAGTTCTTGTTCGCAGAGAACTTGACCTTTCTGCCAAAGAGTTGCAGGAGCAAGTACGAAGTGGTGATGCCAGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGGAGGAAGTTTTATCCAGCTGCCACCAAGTTTCTGCTTCAAGCAATTGAGAAATGGGATGGGGATAAGCAAGATCTTGCGCAGGTGTACAATGCTCTTGGTGTCAGCTACGTCCGTGATGGGAAGGTTGACAAAGGAATTGCTCAGTTTGAGATGGCTGTAAAGCTTCAACCAGGCTATGTCACAGCATGGAACAATCTTGGGGATGCCTTTGAGAACAAAAAAGAATATAAGGCTGCTCTTAAGGCATTTGAAGAAGTCCTGCTATTTGATCCTAACAACAAGATTGCTCGGCCCAGAAGAGACGCTTTGAAGGACCGCGTTGAAATGTACAAAGGGGTTCCTGTCAAGTCCAAAGAGAAATAA 1065 0.4376 MTWQNGIALLDNPCELRSSKEKKKMVGSSFGHFLLLSYTPPSSLSTLFPTKTLTLSSSPFRCKCFFKNMKASGIRQVGLTTLHGHRVDAMKSSIVLKMFQREMTIESHNTLVTKQSEMNDFTTEDLEDGGLLSKLVYTFLFGQTLSVVSPGLSYASDSMKMNQIYEVGELFDLSIQLLYLVSLLGLLGVGTYFVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDKQDLAQVYNALGVSYVRDGKVDKGIAQFEMAVKLQPGYVTAWNNLGDAFENKKEYKAALKAFEEVLLFDPNNKIARPRRDALKDRVEMYKGVPVKSKEK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03173 354 ProSiteProfiles TPR repeat profile. 294 327 IPR019734 GO:0005515
Adu09g03173 354 SUPERFAMILY TPR-like 219 331 IPR011990 GO:0005515
Adu09g03173 354 PANTHER TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC 58 347 - -
Adu09g03173 354 Pfam Tetratricopeptide repeat 265 324 - -
Adu09g03173 354 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Adu09g03173 354 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 58 347 - -
Adu09g03173 354 SMART tpr_5 260 293 IPR019734 GO:0005515
Adu09g03173 354 SMART tpr_5 294 327 IPR019734 GO:0005515
Adu09g03173 354 ProSiteProfiles TPR repeat region circular profile. 294 327 - -
Adu09g03173 354 Gene3D Tetratricopeptide repeat domain 201 347 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03173 - - ahf:112712552 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03173 09 119620148 119622948 Adu09g03173 09 119620148 119622948 ECH