Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g03172 ATGGCTCACCTTCTCCACACTCCTTTCATTCCTTCTTCTTCCTCCTCCGCCGCCCTCCGCCGCAGCTCGGCCTCCTCGGGCACTCGTAGGCCTCCAGTGTCTCCCGGCGTGGTCCGCGCCAAGATCCGGGAGATCTTCATGCCGGCACTGAGCTCAACCATGACGGAGGGAAAGATCGTGTCCTGGGTNNNNNNNTCCGACAAGGCTGACATGGACGTAGAGACCTTCTACGATGGTTACCTCGCCGCCATCATGGTTGACGAGGGCGGTGTCGCCGCCGTCGGAGCTCCCATCGCCCTCCTCGCCGAAAACGAGGACGAGATCGAACAAGCAAAGTCCAAAGCACAGTCACCTTCATCGGCTTCTTCTTCTGCTTCGTCTTCTCCTGCACCTGCAGCTGCGCCAGCAGTGGAGGCTCAATCTGATAAGGCTCCCGTTAAGGCTGCTGCTGCTGCTGCTCCGGCGGTGGCATCCACGCATCCGGCGTCGGAGGGAGGGAAGAGAGTGGTGGCGTCTCCGTATGCGAAGAAGCTTGCGAAGGAGCTGAAGGTGGAGCTTGGGAGGATTGTGGGGACTGGACCTTTGGGCAGGATTGTAGCTAAGGATGTTGAGGCTTTTGCAGCTTCTGGTGCTGCTGCTGCTGCGGCTCCTGCTGCGGCCGCGGCACCGGCGGCTGCGAAGAGTGGTAGTGGGGTTGAATTGGGGAGTGTGGTGCCTTTTACGACAATGCAGAGTGCTGTGAGTAGGAACATGGTGGAGAGTTTGGGTGTTCCTACTTTTAGAGTTGGGTATACTATCACCACTGATGCACTCGATGCTCTCTACAAGAAGATCAAGTCAAAGGGAGTTACTATGACAGCATTGCTTGCCAAGGCTACAGCACTTGCTCTGGTTAAACACCCTGTTGTTAACTCTAGTTGTAGAGATGGTAATAGCTTTACGTATAATAGCAGCATCAACATCGCAGTTGCTGTTGCTACTGAAGGCGGACTGATTACTCCAGTGCTTCAGGATGCTGATAAGGTTGACGTCTATACATTGTCAAGAAAGTGGAAGGAGTTGGTTGATAAGGCCCGGGCCAAGCAGCTCCAACCTCATGAGTACAGCACAGGTACCTTCACTCTGTCCAACCTTGGAATGTTTGGTGTTGATCGCTTTGATGCTATTCTTCCACCTGGAACTGGAGCCATAATGGCTGTTGGATCATCACAGCCAACTGTTGTGGCTACCAAGGATGGTCGCATTGGCATGAAGAACCAAATGCAGGTCAATGTTACAGCAGATCATCGCGTGATATATGGTGCTGATCTGGCTCAATTCTTGCAAACCCTGTCACAAATTATTGAGGACCCCAAGGATCTTACTTTCTAG 1371 0.5332 MAHLLHTPFIPSSSSSAALRRSSASSGTRRPPVSPGVVRAKIREIFMPALSSTMTEGKIVSWXXXSDKADMDVETFYDGYLAAIMVDEGGVAAVGAPIALLAENEDEIEQAKSKAQSPSSASSSASSSPAPAAAPAVEAQSDKAPVKAAAAAAPAVASTHPASEGGKRVVASPYAKKLAKELKVELGRIVGTGPLGRIVAKDVEAFAASGAAAAAAPAAAAAPAAAKSGSGVELGSVVPFTTMQSAVSRNMVESLGVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVKHPVVNSSCRDGNSFTYNSSINIAVAVATEGGLITPVLQDADKVDVYTLSRKWKELVDKARAKQLQPHEYSTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGSSQPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLSQIIEDPKDLTF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g03172 456 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 170 207 IPR004167 GO:0016746
Adu09g03172 456 Gene3D - 231 455 IPR023213 -
Adu09g03172 456 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 35 456 IPR045257 GO:0006086|GO:0045254
Adu09g03172 456 Gene3D - 156 211 IPR036625 GO:0016746
Adu09g03172 456 MobiDBLite consensus disorder prediction 113 130 - -
Adu09g03172 456 Gene3D - 64 127 - -
Adu09g03172 456 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 237 454 IPR001078 GO:0016746
Adu09g03172 456 MobiDBLite consensus disorder prediction 109 139 - -
Adu09g03172 456 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 5 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 35 456 - -
Adu09g03172 456 SUPERFAMILY Single hybrid motif 41 120 IPR011053 -
Adu09g03172 456 CDD lipoyl_domain 44 101 - -
Adu09g03172 456 Pfam e3 binding domain 169 204 IPR004167 GO:0016746
Adu09g03172 456 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 162 208 IPR036625 GO:0016746
Adu09g03172 456 SUPERFAMILY CoA-dependent acyltransferases 237 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g03172 Adu-Chr9 119616447 119620027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g03172 1 456 Acyl Lipid Metabolism Gene Families AT1G34430 73.375 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g03172 K00627 - gmx:100799926 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g03172 09 119616447 119620027 Adu09g03172 09 119616447 119620027 ECH