Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02874 ATGGGGAGTGTGAGTGTTCAACTCCAGTGGAGATGGAACCAACCACCACCGTCGCCGTCACTGTCACTACCAGTTACCGTTACCATGACAGTGATGATGCAGAGGTGTAGGTGTACGCTAACCAAACAAGGCGAACGCTTCCTCACAAAGCTAGCAGCAAATTCCGATTCCGGAACCCACACATTCATTCGACGATTCGTTAATGGTTCTCCCAAATCGGTTGCTCTATCCACTCTCTCTCATCTTCTATCTCCTTCCTCCTCCTTCCCCCACCTCTCTTCTCTCGCCCTCCCTCTTTATTCATGTATCGCCCAAGCTTCCTGGTTCACTTGGAACCCTGCCATTGTTGCGGACCTTGCAGCGCTTCTTGATCAACTGGGTCGTTCTGAGGAAGCTGAAGCTCTGGTCTTTGAGACCACTTCCAAGCTCGAATCACGAAACAGAGAGCTTGCTCTTTTCTACTGTAAGTTGCTTGAGTCACACTCCAAGCGAGGCTCACAGAAAGGTTTTGATGTTGCTTATTGTTACCTGAACCAGCTTCTTCGTAGTTCTTCCTCTGTTTACATAAAACGCAGGGCTTTTGAGTATATGATTAGTGGTTTGTGTGCAATGGATAGGCCTCGTGAAGCCGAGGATTTGGTTGAGGATTTGAGAGGCAATGGTGGAGGGATTGACCCTTCAGCTTTTGAGTTGAAGTCCATTATGTATGGTTATGGGAGGTTGGGGTTGTTCCATGATTTGCAGAGAGTTGTGGATCAAATGAAGAGAGGTGGCTTTGAGATTGACACTGTTTGTGCCAATATGCTTCTTTCAACTTATGGTACTCATGGTGAGCACATGGAAATGGTTTCATGGCTTAAGAAGATGAGAAGCTCAGGCATCTCATTCTCAGTCAGAACCTACAATTCTGTATCAAACTCTTGCCCAATGATCACGAGAATGATGGCGGAGCTGAATGAGTTGCCGCTGTCAATTGAGGAATTGAATGTTAGATTGGAAGGAGGGGAGGCTATGGTAGTTAAGGAGTTACTGGATTCTTGTGTGATTTTGGAGGAGGTAATGGTGTGGGATTCATCGGAGGCTAAATTGGATTTGCATGGATGTCATTTGGGTTCATCCTATTTGATTATGCTGCTTTGGTTGAAAGAGATGCGGCGGAGATTGAATGACTCGAATTATGGGATTCCAGCAGAAATCACTGTGGTTTGTGGGTTGGGAAAGCATAGCAATGTCAGAGGAGAGTCTCCTGTAAAAGTGTTGGTTAAGAAGATGATGGTGAATATGGGAAGTCCCTTGAGGATTGATAGGAAGAATAATGGTTGCCTTGTAGCCAAAGGTAGAGCCGTGAAAAACTGGTTATGTTAA 1365 0.4571 MGSVSVQLQWRWNQPPPSPSLSLPVTVTMTVMMQRCRCTLTKQGERFLTKLAANSDSGTHTFIRRFVNGSPKSVALSTLSHLLSPSSSFPHLSSLALPLYSCIAQASWFTWNPAIVADLAALLDQLGRSEEAEALVFETTSKLESRNRELALFYCKLLESHSKRGSQKGFDVAYCYLNQLLRSSSSVYIKRRAFEYMISGLCAMDRPREAEDLVEDLRGNGGGIDPSAFELKSIMYGYGRLGLFHDLQRVVDQMKRGGFEIDTVCANMLLSTYGTHGEHMEMVSWLKKMRSSGISFSVRTYNSVSNSCPMITRMMAELNELPLSIEELNVRLEGGEAMVVKELLDSCVILEEVMVWDSSEAKLDLHGCHLGSSYLIMLLWLKEMRRRLNDSNYGIPAEITVVCGLGKHSNVRGESPVKVLVKKMMVNMGSPLRIDRKNNGCLVAKGRAVKNWLC 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02874 454 ProSiteProfiles Smr domain profile. 363 447 IPR002625 -
Adu09g02874 454 SMART SMR_2 360 447 IPR002625 -
Adu09g02874 454 PANTHER OS02G0120000 PROTEIN 25 454 - -
Adu09g02874 454 Pfam PPR repeat 197 221 IPR002885 -
Adu09g02874 454 Pfam PPR repeat 266 294 IPR002885 -
Adu09g02874 454 Pfam PPR repeat 233 259 IPR002885 -
Adu09g02874 454 SUPERFAMILY SMR domain-like 360 445 IPR036063 -
Adu09g02874 454 TIGRFAM PPR: pentatricopeptide repeat domain 265 296 IPR002885 -
Adu09g02874 454 PANTHER ATPASE EXPRESSION PROTEIN 3 25 454 - -
Adu09g02874 454 Gene3D - 347 445 IPR036063 -
Adu09g02874 454 Gene3D Tetratricopeptide repeat domain 122 322 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02874 Adu-Chr9 116371041 116372945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g02874 125 306 Glycosyltransferase AT1G05670 24.590 6.63e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02874 - - gmx:100805233 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02874 09 116371041 116372945 Adu09g02874 09 116371041 116372945 ECH