Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02663 ATGGCAATCCCCTGCCCTCATTTCATTGCCTCCGAGAAAGCAGCCATGGAAGCTGGCCTTCTTCTCCCCTCTTCCTCTCTCTCTCAGCTCATTCTCTCCCAAGACGATTTGAAGAAAATTGCCGCCTACAAAGCCGTCGAGTACGTCGAATCCGGTATGGTTCTCGGCCTCGGAACCGGCTCCACTGCCAAACACGCTGTCGACCGAATCGGCGAGCTTCTCCGTCAGGGCAAGCTCAAAGACATCGTCGGAATACCCACTTCCAAGAAAACGCACGAGCAAGCCCTCTCTCTCGGGATCCCCTTGTCGGATCTGAACTCTCACCCCGTCGTTGATCTCGCCATTGACGGCGCCGACGAGGTTGATCCTCATCTTAACCTCGTCAAGGGCCGCGGTGGCTCCCTCTTGAGAGAGAAGATGGTTGAAGGTGCTTGCAAGAAGTTCGTTGTAATCGTCGATGAGTCCAAGCTCGTTAACTATATTGGTGGTAGCGGTTTGGCTATGCCCGTTGAAGTTATTCAATTTTGTTGGAAGTTCACTGCTTCCAGGCTTCAGAATCTCTTTCAGGAATCTGGTTGCGTTGCAAAGCTCAGAACTTTGGGCGAAAAGGCTGAGCCTTATGTCACTGATAATGGCAACTATATCATTGATTTGTATTTCAAGCAGAGTATTGGAAATTTGAAGGCTGCCAGCGATTCCATTCTGCAAATCGCCGGTGTTGTGGAGCATGGAATGTTCATTGACATGGCTACCACTGTTATTGTTGCAGATTTGGAAAGATGTGGCAGCTCTCGCAATTGCTGGTATTATTTCATATAA 819 0.4957 MAIPCPHFIASEKAAMEAGLLLPSSSLSQLILSQDDLKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKDIVGIPTSKKTHEQALSLGIPLSDLNSHPVVDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVNYIGGSGLAMPVEVIQFCWKFTASRLQNLFQESGCVAKLRTLGEKAEPYVTDNGNYIIDLYFKQSIGNLKAASDSILQIAGVVEHGMFIDMATTVIVADLERCGSSRNCWYYFI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02663 272 Hamap Ribose-5-phosphate isomerase A [rpiA]. 34 264 IPR020672 GO:0004751|GO:0009052
Adu09g02663 272 Pfam Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 83 257 IPR004788 GO:0004751|GO:0009052
Adu09g02663 272 SUPERFAMILY NagB/RpiA/CoA transferase-like 34 181 IPR037171 -
Adu09g02663 272 PANTHER RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED 1 256 - -
Adu09g02663 272 CDD RPI_A 37 257 IPR004788 GO:0004751|GO:0009052
Adu09g02663 272 Gene3D - 37 257 - -
Adu09g02663 272 SUPERFAMILY D-ribose-5-phosphate isomerase (RpiA), lid domain 166 247 - -
Adu09g02663 272 PANTHER ISOMERASE, PUTATIVE-RELATED 1 256 - -
Adu09g02663 272 Gene3D - 160 244 - -
Adu09g02663 272 TIGRFAM rpiA: ribose 5-phosphate isomerase A 37 257 IPR004788 GO:0004751|GO:0009052
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02663 Adu-Chr9 114138753 114140578 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02663 K01807 - gmx:100795150 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02663 09 114138753 114140578 Adu09g02663 09 114138753 114140578 ECH