Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02643 ATGCGTTGTGTTGCAGATGCTGCTTGTGTTTTCACTCCACCTCCAAAGCATTTTGCCACTTCTCGCCATGCTCTTTCGAATTTGGTTCCAACTCGAGCATCCTTCCTTGCTGGTTCCCCACTCTTGATTCAAACAAGTTATGAAAGGAAAACCGTATGCAAGGCAATGCCATTTTTAATAAAGTGCGAGCAAAGTTCACAGGGAGGGAACAGTGTGGATGTATGGCTAGGCCGGCTAGCCATGGTTGGCTTTGCATCGGCCATCACTGTCGAAATTGCTACTGGCAAGGGTCTCCTTGAGAATTTTGGAGTTACAGCTCCACTGCCTACAGTTGCCTTGGCAGTAACAGGACTGGTGATGTCTCGGTTGGCAAAGAGGTTCTTACCAAAATATGAATGGAGGATCCCAATGGTGGGTCTTGATTCTTCAGGGAAGACTACCATTCTCTACAAGCTCAAACTGGGGGACACAGTCAGAACCATACCAACTATTGGTTTTAATGTGGAGAGTGTAGAGTACAAAAATGCAAGCTTTACTATCTGGGATGTTGGAGGACAACAGAAGATTCGGCCATTGTGGAGGCATTACTTTCAAAACACCATTGGACTTATCTTTGTGGTGGATAGCAGTGACCGGCACAGAATCATAGAAGCTCGTAATGAACTCCATAATATTCTAACTGATCATGAACTACGCAATGCTATACTACTTGTGTTCGCCAATAAGCAGGACCTCTCAACTGCCATGAGTGTTGCTGAGATTGCTGATAAGCTTGGCTTACATTCGCTTGAAGATCGTAGTTGGTACATTCAGAGCACTTCTGCCATCTCAGGCCAAGGACTCTATCAAGGTCTTGATTGGCTAATTGACAACATATCAACCAGGAAGCATGAGAAATGA 900 0.45 MRCVADAACVFTPPPKHFATSRHALSNLVPTRASFLAGSPLLIQTSYERKTVCKAMPFLIKCEQSSQGGNSVDVWLGRLAMVGFASAITVEIATGKGLLENFGVTAPLPTVALAVTGLVMSRLAKRFLPKYEWRIPMVGLDSSGKTTILYKLKLGDTVRTIPTIGFNVESVEYKNASFTIWDVGGQQKIRPLWRHYFQNTIGLIFVVDSSDRHRIIEARNELHNILTDHELRNAILLVFANKQDLSTAMSVAEIADKLGLHSLEDRSWYIQSTSAISGQGLYQGLDWLIDNISTRKHEK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02643 299 Gene3D - 120 299 IPR027417 -
Adu09g02643 299 SUPERFAMILY Chlorophyll a-b binding protein 72 112 - -
Adu09g02643 299 PANTHER ADP RIBOSYLATION FACTOR-RELATED 117 295 IPR024156 GO:0005525
Adu09g02643 299 SMART sar_sub_1 116 292 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 CDD Arf1_5_like 134 291 IPR045872 GO:0003924
Adu09g02643 299 Pfam ADP-ribosylation factor family 122 292 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 PRINTS GTP-binding SAR1 protein signature 189 214 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 PRINTS GTP-binding SAR1 protein signature 234 255 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 PRINTS GTP-binding SAR1 protein signature 134 157 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 PRINTS GTP-binding SAR1 protein signature 162 186 IPR006689 GO:0003924|GO:0005525
Adu09g02643 299 PANTHER ADP-RIBOSYLATION FACTOR 2-LIKE ISOFORM X1 117 295 - -
Adu09g02643 299 TIGRFAM small_GTP: small GTP-binding protein domain 132 257 IPR005225 GO:0005525
Adu09g02643 299 ProSiteProfiles small GTPase Arf family profile. 126 292 - -
Adu09g02643 299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 296 IPR027417 -
Adu09g02643 299 SMART arf_sub_2 116 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02643 Adu-Chr9 113958554 113961815 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02643 K07937 - jre:108996172 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02643 09 113958554 113961815 Adu09g02643 09 113958554 113961815 ECH