Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g02315 ATGCATCCAACAACTTTGGGACAACATGGTAGCGCAATTCATTTAACCTCCGCCGAATATAACGGCGATTTAGCCACTCGATCCATTAACATCACCCTCTCACGCCCCAGTTCCGGATCTGCACCTCACAGGCCGCAAACTTTCTTAAAGCCTCCAACTTTTGCTTCCAAAGTGTTCCAGCCACAAGGGAACAATGACGAGTCCTTCAAAGCTTCCTTCACAACCTGCCACGTCATCGACGCTAGGAAACCTACACCTACGGAAGTTGTGCCCGTCTCACCCGAGGATGACCAAAAGATTGAGGAAGAGTTGCAGCACTTGCGTGGCTTACAACAGCTTGGTGACACTGCTGTCGGAATGTGGTCAAAGCCTACGTTTAGGAGAAAGACTAAGATTGTTTGCACCATTGGGCCTTCTACGGATACAAGGGAAATGATTTGGAAGCTGGCTGAGGCTGGGATGAATGTTGCGCGTTTGAATATGTCTCATGGTGACCATGCTTCTCATCAGAAAGTTATCGATTTGGTAAAGGACTATAATGCACAATCCAAGGATAATGTAATTGCAATAATGCTCGACACCAAGGGTCCTGAGGTTAGGAGTGGGGACCTGCCACAGCCAATTACATTAGAACCTGGGCAAGAGTTCACTTTCACTATCCGGAGGGGTGTCGGAACCACAGATTGTGTTAGCGTTAACTATGATGATTTTGTTAATGATGTAGCAGTTGGGGACATGCTTCTTGTTGATGGTGGTATGATGTCATTGATGGTAAAGTCTAAGACCGAGGATTCTGTAAAATGTGAAGTAGTTGATGGAGGAGAGCTTAAATCGAGGAGACATTTGAATGTTAGAGGAAAAAGCGCAACATTGCCTTCAATCACTGAGAAGGACTGGGATGACATTAAATTTGGAGTGGACAACCAAGTTGACTTTTATGCCGTTTCCTTTGTTAAGGATGCACAAGTAGTTCATGAACTGAAGAACTATCTGAAAAGCTGTGGTGCCGATATACATGTCATTGTAAAAATTGAAAGTGCAGACTCCGTTCCGAACCTGCATTCAATAATTACAGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGGGCTGAGCTACCTATTGAGGAAGTTCCACTTTTGCAGGAGGAGATAATCAGAATATGCCGTAGCATGGGAAAGGCTGTGATTGTTGCAACAAATATGCTGGAAAGCATGATTGTTCACCCAACTCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCTGATGGAATAATGCTTTCTGGTGAAACTGCTCATGGAAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCATTACGGACAGAAGCCACTATACCAGGTAGTCAGATGCCACCTAATATTGGTCAAGGATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCCAACACCCTTGGAACCTCAACTGTTGTCTTCACTAGATCAGGCTTCATGGCTATTCTTCTAAGCCACTATCGACCAACTGGCACCATATTTGCTTTTACAGACCAGAAGCGGATACAGCAGCGGCTGGCTTTGTATCAAGGAGTTTGTCCTATATACATGGAATTCTCTGATGATGCTGAAGAGACATTCAAAAGAGCCTTGGATTTGTTGCAGAGGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAAAGTGGAAGACAGCCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTTAGAACAGTGTAA 1794 0.4476 MHPTTLGQHGSAIHLTSAEYNGDLATRSINITLSRPSSGSAPHRPQTFLKPPTFASKVFQPQGNNDESFKASFTTCHVIDARKPTPTEVVPVSPEDDQKIEEELQHLRGLQQLGDTAVGMWSKPTFRRKTKIVCTIGPSTDTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKDYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLEPGQEFTFTIRRGVGTTDCVSVNYDDFVNDVAVGDMLLVDGGMMSLMVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSVPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGSQMPPNIGQGFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPTGTIFAFTDQKRIQQRLALYQGVCPIYMEFSDDAEETFKRALDLLQRQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRTV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g02315 597 SUPERFAMILY PK beta-barrel domain-like 197 288 IPR011037 -
Adu09g02315 597 Pfam Pyruvate kinase, alpha/beta domain 485 577 IPR015795 -
Adu09g02315 597 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 119 462 IPR015813 GO:0003824
Adu09g02315 597 Gene3D - 198 291 IPR015806 GO:0004743|GO:0006096
Adu09g02315 597 Gene3D - 130 455 IPR040442 -
Adu09g02315 597 PRINTS Pyruvate kinase family signature 392 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 310 324 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 186 202 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 367 391 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 417 435 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 436 452 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 PRINTS Pyruvate kinase family signature 340 366 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 Gene3D - 470 597 IPR036918 -
Adu09g02315 597 ProSitePatterns Pyruvate kinase active site signature. 338 350 IPR018209 GO:0004743|GO:0006096
Adu09g02315 597 PANTHER PLASTIDIAL PYRUVATE KINASE 2 61 597 - -
Adu09g02315 597 SUPERFAMILY PK C-terminal domain-like 446 597 IPR036918 -
Adu09g02315 597 PANTHER PYRUVATE KINASE 61 597 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 Pfam Pyruvate kinase, barrel domain 128 464 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Adu09g02315 597 TIGRFAM pyruv_kin: pyruvate kinase 128 597 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g02315 Adu-Chr9 110071057 110075671 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g02315 K00873 - gmx:100818193 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g02315 09 110071057 110075671 Adu09g02315 09 110071057 110075671 ECH
Adu05g03458 05 107059845 107064434 Adu09g02315 09 110071057 110075671 PCT