Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01782 ATGTTCAACTTCAACAAAATCTTGTGCCTCCTATGTTTCCCTTTCCTGTGTTTTGAATTGTCTCATTGTACTTTATCTACTACTTCTTCACTAGTAAGTGACTTCACTTCTTGTTTGGCCAATCACAACATCAACAACTTCACCACTTTCCCTTACAAAGATTACGATAAGTCATCAGCTCATGACTACTTCAAGATTCTGAATTTTTCCATTCAGAATCTCCGGTTCGCCGGGGGTGCAGTTCCTAAGCCTGTAGCAATAGTACTTCCAGAGAGTTTGGAGCATCTACAGAGAAGTGTAGCATGCTGCAGAGAATTCTCCTTTGGAATCAGAGTGAGGTGTGGTGGACATAGCTACGAAGGTACTTCATCAGTTTCGGACGACGGATCACTCTTCACCATCATTGACATGATGAATTTGAACCATGTTTGGGTGGATATGGAGACAGAGACAGCAATGGTTGAAGGTGGTGCAACCTTAGGAGAGACCTATTATGCTATCTCGCGAGCCAGCAATGAACACGGCTTCTCAGCAGGGTCATGTCCAACTGTAGGAGTTGGAGGACACATTGGTGGGGGAGGATTTGGGTTGCTCTCTAGAAAACATGGCCTCGCGGCCGACAATGTCATCGACGCACTTCTTGTTGATGCCAATGGGCGATTGCTGAGCCGAGAATCCATGGGGGAAGACGTGTTTTGGTCTATTAGAGGAGGAGGTGGTGGAATTTGGGGAATTGTCTATGCTTGGAAAATCAAGCTATTGAAAGTTCCACAAGTTGTAACTGCTTTCGCGGTATCAAGAAATGGCACAAGAAAACATGTTGCCAATCTTGTTCATAAATGGCAAAATGTAGCACCAAATTTGGATGATGATTTCTACTTGTCATGCTTTCTTGGTGCTAATTTACCTGAAGCCAAATCTATAGGCATATCAGCTACATTTAAAGGGCTTTTTCTTGTTCCTAAAGGAATTGCCATGTCCATCATAAACCATGATTTTTCTGAATTGGGAATTTTGGAACAAGAATGTGTAGAAATGAGTTGGATTGAGTCAATTGTTTTTTTCGCTGGCCTAAGTGATGGAGCCTCAGTTCCTGATTTGAAGAATAGGTACCTTGCAGACAAAGAATACTTCAAAGCCAAATCAGATTTTGTGAAGGCTCCTATTCCTATTGAGGGAATTGAAATTGCACTGGAGATTCTAGAAAAGGAGCCTAAAGGGCTCGTAATTCTTGACCCTTCTGGTGGAAAAATGCATAGTATAAGCAGTGATTCAATTGCTTATCCACATAGAAAAGGAAACATTTTTTCAATTCAGTATTTGATATATTGGAAAGAAGAGGACAATGATAAGAGCAATGATTATATTGATTGGATGAGAGGGTTCTATGATTCTATGGCACCATTTGTTTCATGGGGTCCAAGGGCTGCATATGTTAATTACTTGGACTTTGACCTTGGAGTTATGAACATGATTAGGTTTAGCAATGTGAAGGATGCTGTGGATCATGCAAGGGTTTGGGGTGAGAAGTACTTTTTGGGTAACTATGATAGGTTGGTGAAGGCCAAGACTTTGATTGATCCAAACAATGTTTTCACTAATGAACAAGGGATTCCTCCCTTGTACTTTGCTCGTCCTAGTGGCAAA 1647 0.4141 MFNFNKILCLLCFPFLCFELSHCTLSTTSSLVSDFTSCLANHNINNFTTFPYKDYDKSSAHDYFKILNFSIQNLRFAGGAVPKPVAIVLPESLEHLQRSVACCREFSFGIRVRCGGHSYEGTSSVSDDGSLFTIIDMMNLNHVWVDMETETAMVEGGATLGETYYAISRASNEHGFSAGSCPTVGVGGHIGGGGFGLLSRKHGLAADNVIDALLVDANGRLLSRESMGEDVFWSIRGGGGGIWGIVYAWKIKLLKVPQVVTAFAVSRNGTRKHVANLVHKWQNVAPNLDDDFYLSCFLGANLPEAKSIGISATFKGLFLVPKGIAMSIINHDFSELGILEQECVEMSWIESIVFFAGLSDGASVPDLKNRYLADKEYFKAKSDFVKAPIPIEGIEIALEILEKEPKGLVILDPSGGKMHSISSDSIAYPHRKGNIFSIQYLIYWKEEDNDKSNDYIDWMRGFYDSMAPFVSWGPRAAYVNYLDFDLGVMNMIRFSNVKDAVDHARVWGEKYFLGNYDRLVKAKTLIDPNNVFTNEQGIPPLYFARPSGK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01782 549 Gene3D - 34 140 IPR016167 -
Adu09g01782 549 Gene3D - 145 540 IPR016169 -
Adu09g01782 549 Pfam FAD binding domain 85 222 IPR006094 GO:0050660
Adu09g01782 549 Gene3D - 259 473 - -
Adu09g01782 549 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 256 IPR016166 GO:0071949
Adu09g01782 549 PANTHER FAD-BINDING BERBERINE FAMILY PROTEIN 22 542 - -
Adu09g01782 549 SUPERFAMILY FAD-binding/transporter-associated domain-like 60 257 IPR036318 GO:0050660
Adu09g01782 549 Pfam Berberine and berberine like 477 539 IPR012951 GO:0016491|GO:0050660
Adu09g01782 549 PANTHER OS08G0158400 PROTEIN 22 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01782 Adu-Chr9 86691584 86693230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01782 29 539 Miscellaneous Gene Families AT1G30760 41.779 5.81e-128 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01782 - - gmx:100790761 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01782 09 86691584 86693230 Adu09g01782 09 86691584 86693230 ECH