Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01278 ATGTCCGACACCCAACAAACCCTAATGCCCCTTCACTCCCCCGACCCCGACGATAACGACGAATCCCCTCCTAACCAACCCCAACCCGCATCCCCTGACCCAACCCGAACCGGAACCGGAACCAGAACCGCCATCGCCACCGCCCCTTCCCTCCTCCACCTCTCCTTCAACCAAGACTCTGGCTGCTTCGCCGCCGGCACCGACCGCGGCTTCCGCATCTACAACTGCGATCCTTTCCGCGAGATATTCCGCCGTGACTTCGGCCCAGGCGGCGGCACCTCTCTCGTTCACATGCTCTTCCGGTGCAACATCCTCGCCTTCGTCGGCGGCGGACCTGACCCTCGCCACCCTCCGAACAAGGTCATGATCTGGGACGACCACCAGTCGCGGTGCATTGGCGAGCTCTCATTCCGCTCCGAGGTCAAAGGCGTTTGCCTCCGAAGAGACCGAATCGTTGTAGTTCTCGCGCACAAGATTTTCGTGTACAATTTTGCCGACCTGAAGGTTCTTCACCAAATTGAGACAATTGCGAACCCTAAGGGTTTGTGCGAGGTTTCGCACTTGTCCGGGACGATGGTTCTTGCGTGCCCTGGGTTGCAGAAGGGGCAGGTTAGAGTTGAGCATTACGCCTCAAAGAGGACAAAATTCATCATGGCTCATGACTCGAGGATCGCGTGCTTCTCGCTCACGCAGGATGGGAGGTTGCTCGCTACTGCAAGCAGTAAAGGAACCTTGGTGAGGGTTTTCAATACGTTAGATGGGTCCTTGTTGCAAGAGGTGCGGAGAGGTGCAGACCGTGCGGAAATATACAGCCTTGCCTTCTCTCCTACTGCACAGTGGCTAGCTGTTTCGAGTGATAAGGGGACCGTTCATGTCTTCAACTTAAAGGTTGATTCTGGACTTTTGGGGCTTGACAGATCGAATAGTTCATCCGAGTCAAATCCTAGTTCCCCAACAGCTGTTTCATCTCTTAAATTTATGAAAGGTGTTTTACCCAAGTACTTTAGCTCAGAGTGGTCTGTGGCTCAGTTTCGCCTGCAGGAAGGTTTGCAGCATATTGTTGCCTTTGGCCATCAAAAGAATACTATTGTTATACTAGGCATGGATGGCAGCTTTTATCGATGCCAGTTTGATTCTGCAAATGGAGGAGAGATGACACAACTTGAATATTACAATTTCCTCAAGACAGATGAGACATTCTAA 1203 0.5262 MSDTQQTLMPLHSPDPDDNDESPPNQPQPASPDPTRTGTGTRTAIATAPSLLHLSFNQDSGCFAAGTDRGFRIYNCDPFREIFRRDFGPGGGTSLVHMLFRCNILAFVGGGPDPRHPPNKVMIWDDHQSRCIGELSFRSEVKGVCLRRDRIVVVLAHKIFVYNFADLKVLHQIETIANPKGLCEVSHLSGTMVLACPGLQKGQVRVEHYASKRTKFIMAHDSRIACFSLTQDGRLLATASSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGLDRSNSSSESNPSSPTAVSSLKFMKGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTIVILGMDGSFYRCQFDSANGGEMTQLEYYNFLKTDETF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01278 400 Pfam WD domain, G-beta repeat 263 294 IPR001680 GO:0005515
Adu09g01278 400 MobiDBLite consensus disorder prediction 1 41 - -
Adu09g01278 400 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 40 400 - -
Adu09g01278 400 SUPERFAMILY WD40 repeat-like 50 297 IPR036322 GO:0005515
Adu09g01278 400 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 40 400 - -
Adu09g01278 400 Gene3D - 46 381 IPR015943 GO:0005515
Adu09g01278 400 SMART WD40_4 41 75 IPR001680 GO:0005515
Adu09g01278 400 SMART WD40_4 128 163 IPR001680 GO:0005515
Adu09g01278 400 SMART WD40_4 210 250 IPR001680 GO:0005515
Adu09g01278 400 SMART WD40_4 253 294 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01278 Adu-Chr9 30917389 30920626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01278 K22991 - gmx:100787427 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01278 09 30917389 30920626 Adu09g01278 09 30917389 30920626 ECH
Adu06g01086 06 14226630 14227699 Adu09g01278 09 30917389 30920626 PCT