Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g01116 ATGGCTAAGGAAACTTCTCTGTGCTTCTTGTTTCTCTCATTTTTCATTACCTCATTGTGTTCTGGAGATTTAGTGGGATTTTCAATCAACGTGCTGCAATCGCGTAATCGAATCTTAGTCACAGATCATAGGATCTTGAACTCTCCAACAATCTCCGATTTCTCGATTGATTTCTACCTCAATAAAAGCCTAACTCAAAACTTCATCACTTCAAAACCCTGTTCACTAGTTCCATGGCTAAATTCCCACGTACTGAACTTACTTCCAAAACAAAACATCAAAAGTATCAGTTTTTCTTGTGGAAGTGAGTGCTTCACCAAGAATCAGATACCTTCACTGGTATCTTCTCTTAGATCAGTTCATTCAGTTCTAACTAACAAAGTAAAACTCTCTGTAGCATTTCCTTTGTCATTGTTAGAAAATTTGAAGAGCGCATCGCATGAGAGAGATCTAAGTAACATCCTTTCATTTATAAAGGAAACAAAATCTTATGTGATGATAGAGGACAACATGAACAAATATTTGGATGTTAAGTTTATTCTAGAACGTGCCGCAACTGCTGCTTCTACTCTTGGTTGGGAAGACGTTCCTCTGATTCTATCAATCAAAAGTAAAGTAATCCCAATTTCGGCGAAACTATCAATGTCAAAGCACATGGAATCAAGAAGCAACAAGATGATGGAAAGAATAGTTGCATTGTATGCACAAGAAGTAGACACGACAGAGGAGGAGGATCCGTTTCCGGAATCGAACCAAAGAAGAGCTCTAGATGAAACAACAAACTCAGTAATCACACCACCAGATACACCAACCATAATCACAGTTCCTTCAACGAACCCTGTCACAATTTCACCAACAACAACCAATCCATCCACAATGCCAGTAACAATTCCTTCTTCAACACCGGTTCCTTTAACAACAAATAATCCACCGCCAGCACCGGTAACCAATCCTGGAACATCTTTTGCGCAGCCGCCTCCCACTGCACCTGCCCTGCCGCCTCCGGCCACACAGGGTGGTGGACAGAGCTGGTGTGTGGCGAAGAATGGGGCGGCGGAAACAGCGCTTCAAGCAGCATTGGACTATGCTTGTGGAATGGGGGGTGCTGATTGTTCTCAAATACAGCAAGGTGGAAGTTGTTATAGTCCAGTTACTCTGCAGAATCATGCTTCTTTTGCTTTCAATAGTTACTATCAGAAGCATCCTGGATCAACAAGCTGTGACTTTGGAGGAACTGCTACCTTAGTTAACACCAATCCAAGCTCCGGGTCTTGCATTTTCCCATCATCGTCGTCATCATTAAATTCACAATCACCAACAACACCTATGCAATCACCCCCAACAACAACAACAACTACACCACCAATGACAACAACTCCACCAAGCACCACAACTTATCCACCATCAACTCCAAAATCACCACCTACACCTTCAACTCTTACAGCGCCACCAACAACACCGTCTTCGTCGTCATCTACTACAGGATCCGGCACATCCGGCTATGGTACCCCACCTTCAGTGTTGAACTCAAGCAGCCCAACAACATCAACATCAGGTATAATGCCAGGTTTTGGGTCCCAAACTACTCCTCCTGAAGCAAGCACCACCACCACGTCATCATCGTCCTCCTCACTATTACCCATTGTTGGATACATGGTTCAGCTTTTGATATCATTTGTCACTGCAACACTCATTTTGCTCCCTTAA 1707 0.4318 MAKETSLCFLFLSFFITSLCSGDLVGFSINVLQSRNRILVTDHRILNSPTISDFSIDFYLNKSLTQNFITSKPCSLVPWLNSHVLNLLPKQNIKSISFSCGSECFTKNQIPSLVSSLRSVHSVLTNKVKLSVAFPLSLLENLKSASHERDLSNILSFIKETKSYVMIEDNMNKYLDVKFILERAATAASTLGWEDVPLILSIKSKVIPISAKLSMSKHMESRSNKMMERIVALYAQEVDTTEEEDPFPESNQRRALDETTNSVITPPDTPTIITVPSTNPVTISPTTTNPSTMPVTIPSSTPVPLTTNNPPPAPVTNPGTSFAQPPPTAPALPPPATQGGGQSWCVAKNGAAETALQAALDYACGMGGADCSQIQQGGSCYSPVTLQNHASFAFNSYYQKHPGSTSCDFGGTATLVNTNPSSGSCIFPSSSSSLNSQSPTTPMQSPPTTTTTTPPMTTTPPSTTTYPPSTPKSPPTPSTLTAPPTTPSSSSSTTGSGTSGYGTPPSVLNSSSPTTSTSGIMPGFGSQTTPPEASTTTTSSSSSSLLPIVGYMVQLLISFVTATLILLP 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g01116 568 MobiDBLite consensus disorder prediction 304 334 - -
Adu09g01116 568 MobiDBLite consensus disorder prediction 460 482 - -
Adu09g01116 568 Gene3D Glycosidases 23 179 - -
Adu09g01116 568 Gene3D - 341 440 - -
Adu09g01116 568 PRINTS Proline rich extensin signature 273 289 - -
Adu09g01116 568 PRINTS Proline rich extensin signature 300 312 - -
Adu09g01116 568 PRINTS Proline rich extensin signature 314 335 - -
Adu09g01116 568 PRINTS Proline rich extensin signature 435 460 - -
Adu09g01116 568 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 250 442 - -
Adu09g01116 568 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 250 442 IPR044965 GO:0004553|GO:0005975
Adu09g01116 568 MobiDBLite consensus disorder prediction 261 303 - -
Adu09g01116 568 MobiDBLite consensus disorder prediction 425 459 - -
Adu09g01116 568 SMART X8_cls 343 427 IPR012946 -
Adu09g01116 568 MobiDBLite consensus disorder prediction 261 337 - -
Adu09g01116 568 MobiDBLite consensus disorder prediction 483 543 - -
Adu09g01116 568 Pfam X8 domain 344 414 IPR012946 -
Adu09g01116 568 MobiDBLite consensus disorder prediction 425 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g01116 Adu-Chr9 21680419 21683907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g01116 77 430 Glycoside Hydrolase AT2G05790 30.457 1.28e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g01116 - - adu:107465123 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g01116 09 21680419 21683907 Adu09g01116 09 21680419 21683907 ECH
Adu06g00491 06 5839890 5842199 Adu09g01116 09 21680419 21683907 PCT