Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00924 ATGTCATTGATTGATTCATTCTCACATAACAAAATGTGGAGCAATATCTTCCTCTTTGCTCTTCTGTTTTCCACTTACAATAATGTTGCAGTCCAAAGCTTTTGCGTTGCAGATCTGAAGGGAGCACAAACCCCTGAAGGGTTCCTTTGCAAGCCACCCACTTCAGTAAAAGTGGATGACTTCATTCTCTCCGGCCTAAAACCTCCCACCACCCCGCCCTCATCCAACTCTTCCAAGATCACACTAACCCCCGCATTTGTCCAGCAAATCCCTGGCCTTAACGGCCTGGGATTCGCCGTGGCGCGGTTGGACATGGATGTAGGGGGTGTAGTTCCATTGCATTCTCACCCAGATGCCTCTGAGATGCTCATAATAGTGCGTGGAACCGTGACTGCTGGATTCATAGCAGCTGATAATTCTGTTTTCGTGAAGAGATTGAGAAGCGGTGACGTCATGGTTTTGCCACAAGGGTTGTTACATTTTCAGTTGAATTCTGGAAATGGAAAAGCCCTAGTTCATCTCGCTTTTAGTAGCTCAAATCCGAGTACACAGCTTCTTGATGTTGCGTTGTTTGGTAGCAACTTGAATTCTGATTTGATCACCAAGACTACGTTACTTGATCTTTCTGAAGTAAAGAAGCTCAAGGCTGTTTTTGGTGGCAGTGGATAA 669 0.4559 MSLIDSFSHNKMWSNIFLFALLFSTYNNVAVQSFCVADLKGAQTPEGFLCKPPTSVKVDDFILSGLKPPTTPPSSNSSKITLTPAFVQQIPGLNGLGFAVARLDMDVGGVVPLHSHPDASEMLIIVRGTVTAGFIAADNSVFVKRLRSGDVMVLPQGLLHFQLNSGNGKALVHLAFSSSNPSTQLLDVALFGSNLNSDLITKTTLLDLSEVKKLKAVFGGSG 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00924 222 SMART Cupin_1_3 64 212 IPR006045 -
Adu09g00924 222 CDD cupin_OxOx 31 218 - -
Adu09g00924 222 SUPERFAMILY RmlC-like cupins 32 218 IPR011051 -
Adu09g00924 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 16 218 - -
Adu09g00924 222 Pfam Cupin 72 211 IPR006045 -
Adu09g00924 222 PRINTS Germin signature 177 192 IPR001929 GO:0030145
Adu09g00924 222 PRINTS Germin signature 144 164 IPR001929 GO:0030145
Adu09g00924 222 PRINTS Germin signature 114 134 IPR001929 GO:0030145
Adu09g00924 222 Gene3D Jelly Rolls 27 222 IPR014710 -
Adu09g00924 222 ProSitePatterns Germin family signature. 109 122 IPR019780 GO:0030145
Adu09g00924 222 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 16 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00924 Adu-Chr9 15130427 15131218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00924 11 221 Miscellaneous Gene Families AT5G20630 52.133 5.31e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00924 - - adu:107464848 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00924 09 15130427 15131218 Adu09g00924 09 15130427 15131218 ECH