Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00817 ATGGGGGTAACTGTTGGGTTGAAGGTGTTGTCTCTAGTAGCCATAGCCTCCCTCCTTGTGTTCGAGGAGTGGGTCTCCACACCCGCATGCAACTTGGTTGACCCCTTTGAAGATCCCAAATTTGAAGACGACCCTGAAAACTTGAAGGTCATGCTTGTCGCTGACCTTCTCTTGTTGGGCTCTGAGTCTGGTTATTTAAGCGTCTTTTTCAGGGACTACTACATATCCAAGTTCTTTAGGAAATCTTTTGAAAGTTTGAAGCCTGATTTGCTTCTTGTCTTGGGAGATGTATCTGCAAAAGGTTCTGAGTTGACAAGAAGCAAATGGACGTCAGTGCTTCAGCAGTTTTACCAAATTTTGGGCCCCTTTGTCGATCTTCCATTCCATGCTGTTCTTGGTGATAGGGATATTGGAGACTGCAGTGATCTTGATCTCAACAAAGTTAACTGGATTTCTAGCAAATTACCAGGATTGGATCCTTCTGGCTGTGGTGCATTTGAAATTAATAATATCAGTTTTGTGACACTGAATGCTGTGGCCTTACTCTGTGGTAACAATAGTTTACGGTTTGGTATTGAAAAGGTAATAGAGAGGGAAAGTCTAGAATTTCTCAATGAAACAGGAGGAATAAATGATTCTATCAACACTACAGATGCCAACTATAACTTCATGTGGAGGGTTCACTCCATGCCATCTGGATCAGGACCTGTAATTCTACTCCATTTTCCTTTGAAACAAACAGGAAACCAGCGCCAAGGTGGCATTGATACTTTAAAGAGATCACCTATCTCTTTAATTGAGGGGTTAAATGAGGTCTCAAAACCCAGGGAGCATATTGGAGCTGGTCTGTACAGATTACGTCATACCCTTCCGCAAAATGCTTCTGAGTACATTTTACGAGCTCTGAAGCCAAGGATTATTTTCAGTGCTCACAGCCATTCATTTTCTGACCATGTTCATTTCGACCAAACTAGAGAGATTACAGTTCCGGCAATGTCATGGAATGCAAGAGATGATCCTGGATTTGTGTTTGCCACATTTCAGAAGACAGGTAGAGCAATCAGCATCAGCTATTGTTCTCTCGCTAGAGAATCTCATATTCTTCTTGTCTATATCTCTATAATGGTTTTGTTTTGCTTCTTTTGTTTAAAAGGATAtgataaagaaactgctgctattatttatgaagatgttcttatcacatatgaggaaaattatgtgaatcttgtctgtgatgattccacttggattatggactctgCAATTCTTCTACAAATGGCTGAAACTCCAAACGCCTCAACGTCCTCACCAAAACCCTCTACCATGGACCCTCAATCCCAGCCTTCCCAAAATCCAAACCCAAACCCAAACCCAATCCCTAATTCAAATCCCAACCCTTCAATGTCAGCGCAATCGCCTTCGATCTCAAACTTCTCTCAACAACAATCCCCTTCAATTCACAATATCTCTTCCCCTTCTCTCCCCCCTCTCCCCCAAGACCCTCAGCAATCGCAGCAACAGCAACCACAACAGCAGCAGCAGCAACAGCTTCAGCAACAATCACAGCAACAGCAACAAACGCAACAGCAGCAACAACAGCAGCAGCAACAGTCGCTTGTGATGCAGCAGTCTCAGGGGATGACCATGAACCCTATGTCCCAATTCCAACTCCAGCAGACCCTCCAGCGGTCCCCTTCGATGACGCGGGTCAATCAAATGCAGTCTCAGCAGCAGCAGCAGCAGCTTGGCGTTATGCGGCAGCAGGCTGGGTTGTACGGCGGCCAAATGAATTTCGGCGGTTCTGCTTCGGCGGCAGCTCAGCTGCAGAATCAGCAGCAGCAGCAGCAACAACAGCAGTTGGGAGGGTCGAGTCTTTCGCGCTCGGCTCTGATGGGGCAGAGTGGGCACTTCCCTATGTTGTCTAGTGCTGGAGCAGCGCAGTTTAACTTGTTGTCCTCGCCAAGGCAGAAGGGTGGGCTAGTCCAGGGATCGCAATTCTCATCAGCTAATTCTGCTGGACAGCCACATCAAGGAATGCAAGCAATGGGGATGATGGGGACGCCAAATCTCAGCTCGCAACTAAGAGCTGCTAATGGAGCCATGGCATATGCTCAGCAATTGCGAATAAGTCAAAGTCAGATGAGGCAGAATTCACTTAGCTCTCAGCAGGTTCAAGGCTTACGGTCGTCGTCATCCTTGGCCTTTATGAATTCCCCGTTATCTGGCTTGTCTCAGAATGGACAGCCTGCAATGATTAATTCTTTAACACAGCAACAGTGGTTTAAGCAAATGCCTGCAATGTCAGGTCCTGGCTCACCATTGCGTCTTCAACAGCAGAGGCAGCAACAACTGGCTTCACCTGCGGCTCAACTGCAACAAAGTATTACCTTGAATCCACATCAATTGTCCCAGTTAATGCAGCAACAAAAACCAATGGGGCAGCCTCAGCTGCAGCAACAGCAACTGCAACAGCAGCAGCAGCCACCCCAGCAGCAGCAGCAGCAACAACTTCTACAGCAGCAGCAGCAACAACCGTCTCAACTTCAAGCATCTGTTCATCATCATCAGCAGCAGCAGTCTCCAAGGATGTCAGGACCCATGGGCCAAAAGTCACTTAGTCTTACAGGATCACAGCCAGATGCTACTGCATCTGGCGCAACTACCCCAGGGGGAAGCTCAAGCCAAGGAACTGAAGCGACAAACCAACTCCTTGGAAAAAGAAAGATACAGGAGTTAGTTGCACAGGTTGATCCACAGTGTAAGCTGGACCCTGAAGTTATAGACCTTTTTTTAGAGCTTGCTGATGACTTCATTGATGCAGCGACAACACATGGTTGCATGTTGGCAAAACACAGAAAGTCATCCACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTGAAGATACCAGGATATTCAAGTGAAGATAAAAAGAATCAAGGCAAACCTCTACAAAATGACCTACACAAGAGGCGCTTGGATATGATTCGTTCATTGATGGAATCATCACATGCCGAACCAACAAATAACAAGGTTTCAATAGTGATGATCGTAGTTCTTGGCTTCAAGCTTTTTGTTTTAACGGCCTCTATATTGGTTGGAAGAGTTTGCTTGCTGTAA 3135 0.4463 MGVTVGLKVLSLVAIASLLVFEEWVSTPACNLVDPFEDPKFEDDPENLKVMLVADLLLLGSESGYLSVFFRDYYISKFFRKSFESLKPDLLLVLGDVSAKGSELTRSKWTSVLQQFYQILGPFVDLPFHAVLGDRDIGDCSDLDLNKVNWISSKLPGLDPSGCGAFEINNISFVTLNAVALLCGNNSLRFGIEKVIERESLEFLNETGGINDSINTTDANYNFMWRVHSMPSGSGPVILLHFPLKQTGNQRQGGIDTLKRSPISLIEGLNEVSKPREHIGAGLYRLRHTLPQNASEYILRALKPRIIFSAHSHSFSDHVHFDQTREITVPAMSWNARDDPGFVFATFQKTGRAISISYCSLARESHILLVYISIMVLFCFFCLKGYDKETAAIIYEDVLITYEENYVNLVCDDSTWIMDSAILLQMAETPNASTSSPKPSTMDPQSQPSQNPNPNPNPIPNSNPNPSMSAQSPSISNFSQQQSPSIHNISSPSLPPLPQDPQQSQQQQPQQQQQQQLQQQSQQQQQTQQQQQQQQQQSLVMQQSQGMTMNPMSQFQLQQTLQRSPSMTRVNQMQSQQQQQQLGVMRQQAGLYGGQMNFGGSASAAAQLQNQQQQQQQQQLGGSSLSRSALMGQSGHFPMLSSAGAAQFNLLSSPRQKGGLVQGSQFSSANSAGQPHQGMQAMGMMGTPNLSSQLRAANGAMAYAQQLRISQSQMRQNSLSSQQVQGLRSSSSLAFMNSPLSGLSQNGQPAMINSLTQQQWFKQMPAMSGPGSPLRLQQQRQQQLASPAAQLQQSITLNPHQLSQLMQQQKPMGQPQLQQQQLQQQQQPPQQQQQQQLLQQQQQQPSQLQASVHHHQQQQSPRMSGPMGQKSLSLTGSQPDATASGATTPGGSSSQGTEATNQLLGKRKIQELVAQVDPQCKLDPEVIDLFLELADDFIDAATTHGCMLAKHRKSSTLESKDLLLHLEKNWDLKIPGYSSEDKKNQGKPLQNDLHKRRLDMIRSLMESSHAEPTNNKVSIVMIVVLGFKLFVLTASILVGRVCLL 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00817 1044 MobiDBLite consensus disorder prediction 604 633 - -
Adu09g00817 1044 SUPERFAMILY Histone-fold 902 973 IPR009072 GO:0046982
Adu09g00817 1044 CDD TAF12 904 972 IPR003228 GO:0005669|GO:0006352
Adu09g00817 1044 MobiDBLite consensus disorder prediction 772 791 - -
Adu09g00817 1044 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 825 1016 IPR037794 GO:0000124|GO:0005669|GO:0046695
Adu09g00817 1044 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 448 836 IPR037794 GO:0000124|GO:0005669|GO:0046695
Adu09g00817 1044 MobiDBLite consensus disorder prediction 555 582 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 764 791 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 657 678 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 500 516 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 449 463 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 430 516 - -
Adu09g00817 1044 Pfam Transcription initiation factor TFIID subunit A 905 972 IPR003228 GO:0005669|GO:0006352
Adu09g00817 1044 SUPERFAMILY Metallo-dependent phosphatases 67 361 IPR029052 -
Adu09g00817 1044 Coils Coil 510 537 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 657 677 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 430 448 - -
Adu09g00817 1044 Gene3D Histone, subunit A 899 973 IPR009072 GO:0046982
Adu09g00817 1044 Pfam Calcineurin-like phosphoesterase 49 314 IPR004843 GO:0016787
Adu09g00817 1044 MobiDBLite consensus disorder prediction 464 493 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 804 898 - -
Adu09g00817 1044 MobiDBLite consensus disorder prediction 604 631 - -
Adu09g00817 1044 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 825 1016 - -
Adu09g00817 1044 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 448 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00817 Adu-Chr9 12110759 12139381 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00817 K03126 K23362 gmx:100783017 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00817 09 12110759 12139381 Adu09g00817 09 12110759 12139381 ECH