Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00646 ATGGCGGAGTTTCTTGATCTGGAATCCCAGGATGGCGTCCGGATGCCCTGGAACGTCATCCCCGGCACAAAGCAAGAAGCCGCCAACGCCGTCGTCCCCGTCGCCGTAATCTACACTCCCATCAAACACTTCCCCTCATCCGCCGCCCCTCTCTGCTTCCAGCGCAACCACTTCCCCCCTCACTACGCTTCAATCTCCGACGACAATCTCCCTGCTGAGCTTTTTCCACAGTACACAACAATAGAGTACGCGTCCACACCTGATCCTACCGCCACCGTCCCGCCGGTGTTCCTCTTCGTCGTCGACACGTGCGTCATCGAGGAGGAGATTGGATACCTACGCTCCGCCCTGCTTCAGGCGGTGGAGCTTTTGCCGGAGAATTCGCTTGTGGGATTGGTCACGTTTGGGACCTTCGTGCATGTTCATGAGTTAGGGTTCGCTCAGGTTCCTAAGACTTATGTTTTTAAAGGCTCTAAGGATGTTTCGAAGGATCAGTTGCTTGAGCAGATGTGCTTCTTTGCCAATAAGCCGAAGCCGGCCGTTGGCGTCATTGCCGGCGCCCGGGATGGCCTGTCCAGGGAGAGCATTTCGCGGTTCTTGGTGCCTGCTTCTGAGTGCGAGTTCACCCTGAATTCGGTTTTGGAGGAGCTGCAGAAGGATCCTTGGCCGGTGCCTGCTGACCAGCGTGCGACAAGGTGCACCAGTACTGCACTGAGCATAGCAGCCAGTTTGTTGGGGGCATGCGTTCCTGGCTCGGCCGCAAGAATCATGGCTTTCATTGGTGGGCCGGCAACTGAAGGACCTGCTCCTATTGTGTCCAAACAACTTACTGAACCAATTCGTTCCCACAAGGATTTGGATAAAGATTCTGTGCCACATTACCATAAATGTGTGAAATTTTATGATGGACTTGCAAAGCAGCTTGTACATCAAGGTCATGTGCTAGATCTCTTTGCTTGTGCTCTTGATCAGGTTGGCATTGCTGAGCTTAAAACTGCTGTTGAGAGGACTGGTGGCCTTGTTGTACTTGCTGAAAGTTTTGGTCATTCAGTTTTCAAGGATTCACTTAAGCGTATTTTCCAAGCCTCTAATTATGATCTTGGTCTATCATCAAATGGAATATTTGAGATAAACTGCTCTAAGGACTTGAAAGTTCAAGGTATTATTGGCCCTTGTGCAACTCTTGAAAAGAAAACCCCATTGTGTTCAGATACTGTTATTGGTCAAGGAGGTACTAGTGCATGGAAGATGTGTGGCCTTGACAAATCCACATCGTTGTGTCTGTTTTTTGATGTCGTGAGAAAGGAAACTCCTGATGCTACAGTGCAGTCTACAAGCAATCAGTTTTACTTCCAATTCCTGACTTATTATCAGAGTAACAGCGGGGAAATGAGACTTCGAGTTACAACTCTTTCACGTAGATGGGTTGCTGGACCAGGAAGTTCACAGGACTTGATAGCTGGATTTGACCAAGAAGCAGCTGCTATAGTCATGGCACGCCAAGTCTCTTTCAAAATGGAAACAGAGGCTGAATTTGATCCCATCAGATGGTTGGATAAGGCATTGATAAACTTGTGTTCCCGGTTTGGAGAATATCAGAAGGACAGTCCAACTTCTTTTAGTTTGTCTCCCAGGTTGTCAATATTCCCACAATTTATGTTCCACTTACGACGTTCTCAATTTGTTCAGGTCTTCAATAATAGTCCAGATGAGACTGCATACTTTAGAATGATATTGAATCGCGAAAATGTTGCCAATTCTGTTGTCATGGTTCAGCCTTCGTTGATTACCTATTCATTCCATTCAGGTCCTGAACCAGCTCTTCTTGATGTGGCAGCCATTGCTGCTGACAGGATCCTGCTTTTGGATTCATTTTTCACTGTTGTTATTTTTCATGGTTCGACCATTGCTCAATGGCGCAAGGCTGGATATCATAATGAACCAGAACATCAGGCATTTGCTCAGTTACTACGAGCTCCTCATGATGATGCAGAGTCGATAATAAAGGAAAGATTTCCCGTACCTCGCCTAGTTGTTTGCGATCAGCATGGTTCCCAGGCGCGATTTTTACTAGCAAAGTTAAATCCTTCTGCTACTTATAACTCCGACGCTGCTCTTCCTGGAGGAGATATTATCTTTACGGATGACGTTAGCTTCGAGGTCTTTCTGGATCATTTACAGAGATTAGTGGTTCAATAG 2199 0.4716 MAEFLDLESQDGVRMPWNVIPGTKQEAANAVVPVAVIYTPIKHFPSSAAPLCFQRNHFPPHYASISDDNLPAELFPQYTTIEYASTPDPTATVPPVFLFVVDTCVIEEEIGYLRSALLQAVELLPENSLVGLVTFGTFVHVHELGFAQVPKTYVFKGSKDVSKDQLLEQMCFFANKPKPAVGVIAGARDGLSRESISRFLVPASECEFTLNSVLEELQKDPWPVPADQRATRCTSTALSIAASLLGACVPGSAARIMAFIGGPATEGPAPIVSKQLTEPIRSHKDLDKDSVPHYHKCVKFYDGLAKQLVHQGHVLDLFACALDQVGIAELKTAVERTGGLVVLAESFGHSVFKDSLKRIFQASNYDLGLSSNGIFEINCSKDLKVQGIIGPCATLEKKTPLCSDTVIGQGGTSAWKMCGLDKSTSLCLFFDVVRKETPDATVQSTSNQFYFQFLTYYQSNSGEMRLRVTTLSRRWVAGPGSSQDLIAGFDQEAAAIVMARQVSFKMETEAEFDPIRWLDKALINLCSRFGEYQKDSPTSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPDETAYFRMILNRENVANSVVMVQPSLITYSFHSGPEPALLDVAAIAADRILLLDSFFTVVIFHGSTIAQWRKAGYHNEPEHQAFAQLLRAPHDDAESIIKERFPVPRLVVCDQHGSQARFLLAKLNPSATYNSDAALPGGDIIFTDDVSFEVFLDHLQRLVVQ 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00646 732 Pfam Sec23/Sec24 trunk domain 93 360 IPR006896 GO:0006886|GO:0006888|GO:0030127
Adu09g00646 732 Gene3D Severin 592 696 IPR029006 -
Adu09g00646 732 Gene3D - 81 473 - -
Adu09g00646 732 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 593 732 IPR036180 -
Adu09g00646 732 Gene3D Sec23/Sec24 helical domain 487 730 - -
Adu09g00646 732 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 47 IPR037364 -
Adu09g00646 732 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 49 732 IPR037364 -
Adu09g00646 732 SUPERFAMILY vWA-like 93 361 IPR036465 -
Adu09g00646 732 Pfam Gelsolin repeat 604 690 IPR007123 -
Adu09g00646 732 Gene3D - 50 80 - -
Adu09g00646 732 SUPERFAMILY Zn-finger domain of Sec23/24 50 86 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Adu09g00646 732 CDD Sec23_C 582 702 IPR037550 GO:0030127|GO:0090114
Adu09g00646 732 SUPERFAMILY Helical domain of Sec23/24 490 592 IPR036175 GO:0006886|GO:0006888|GO:0030127
Adu09g00646 732 Pfam Sec23/Sec24 helical domain 490 588 IPR006900 GO:0006886|GO:0006888|GO:0030127
Adu09g00646 732 Pfam Sec23/Sec24 beta-sandwich domain 372 476 IPR012990 -
Adu09g00646 732 SUPERFAMILY beta-sandwich domain of Sec23/24 4 489 - -
Adu09g00646 732 Gene3D von Willebrand factor, type A domain 94 369 IPR036465 -
Adu09g00646 732 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 1 47 - -
Adu09g00646 732 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 49 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00646 Adu-Chr9 8370788 8382206 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00646 K14006 - gmx:100803793 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00646 09 8370788 8382206 Adu09g00646 09 8370788 8382206 ECH