Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00640 ATGGAAGGCCTAAAAAGGGTTTCTAGCATGAAGAGGTGCTCCAATGTTGTTAAAACCAAAATTGTCAACAACTTGAATCCAATTTGCCATGCTGGTCAACAATTGACCCTCAAGGGCAAGTTCTTCATTACTCTCACTCAGGATCAAAGAAAATCAATACCTGGAAAATTTATTTCTGTTCAGATTTACAGTGGCACAGAAGTAGATCCAATAACAGGGAAAGGGAAGCTAAGTGAGAAGGCAGTTCTGAAACATGATGGGACAAAAAAACATGACAATGGGGATGCAAAAACCATGATATATAAAATTAGAATAAATGTTTATTCACATTTTGGAACACCAAGAGCTTTTTTGATACAGAACCGATACAAGAAGAGATTCTTCCTTCAATCTGCATCAATTGAAACTTGCAACAATCATATCATTCACTTTGATTGCAATTCTTGGGTGTATCCAATCAAGAAGACCAAATCCGATAGACTCTTCTTCTCAAATGCTTGCTATATTCCAAGCGAAACGCCAAGGGCACTAATGGAATTAAGAAAGGAAGAGCTTGAAAGATTGAGGGGTGAGAGTGATGTAAATAGTGAAAGTGAAGAAAGGAAGGAATGGGGAAGAATATATGAATATGATTGCTATAATGACCTTAGTGACCCTGAGAAAGGTCCTGAATATCTTAGACCTATATTGGGTGCTTCTTGGTTATATCCATATCCTCGTAGACTAAGAACAGCTCGCAAGCCTAGTGCCTCAGGTCCAGCAAATGAGAGCCGGCCAAGGAATTTTGAGATATATGTTCCTTCAGATGAGAGATTTAGTCCAAATAAAATGAAGGAACTGAAATCAAATTCTATACATGCTCTTGCACATTTCTTGTCACCCAAGGCACTTCATCAACAATGTTCCAAAAGCTTTGAATCATTTGAAGATATTCTTGACTTGTTCTCTGCCTCTAGGAACCAAAGAATTGAAGGGTGGGTCAGAGATAACTTAAACAAAATGTTACCAATTCAGAACTTAGAGGAAATTATTCGTCTAATCAAGAATAAACCATTAGAACTTCCTATACCTGAAATATTATCTGAAAATGCATGGGTTTGGAAAGATGACATTGAGTTTGGAAGACAAATGCTGGCTGGAACCCACCCAATCAAAATCCAATGTTTGAAGACATTCCCAACTCAGAGTTCAATAAATCCATCATTCATAGAACAGAGGCTTGAAGGATGGACACTTCCTCAGGCACTGAAGCATGGAAGATTATTCATGCTTGATCACCATGACTACCTGTATCCATTTCTGAACAGAATAAACATAAATGGGGTATGTGCCTATGCATCAAGGACATTCCTATTCTTAAGGAGTGATGGGATGCTTAAGCCTATGGCTATAGAACTTAGCTTGCCAGGCTCATCTCTAAGCAAGGGAATCAGCAGAGTGTTTTTCCCAGCCAAACAGGGAATAGAAGCGGCTCTTTGGCAGCTTGCTAAGGCTCATGTTCAAGCTAACGACACAGTTTATCATCAACTTATTAGCCATTGGTTACACACCCATGCAGTTGTTGAACCATTTATCATTGCCACCAAAAGAAGGCTAAGTGTGATGCACCCAATTCATAGGTTATTGAATCCTCATTTCAAAGACACAATGCATATAAATGCCTTAGCAAGAATTATCCTTATAAATTCAGGAGGAGTTCTTGAGAGAACACTATCATCTGGTGAAATCTCCATGCAATTATCTTCTGAGCTCTATAAAGAGGGAATGGCTATAAAAGATGAAAACAACCCAAGTGGGGTTCAACTTCTCTTGCAAGATTATCCCTATGCAATAGATGGGCTTGAAATTTGGGTAGCCATAAAGAAATGGGTGAAGGATTTCTGTTCATTCTACTACAAAGATGATGAGTCAATTAGGTCAGATGTTGAACTTCAATCTTGGTGGTCAGAGATCCGAACCATTGGACACGGTGACAAGCACAATGAGACATGGTGGTACCAAATTGACACAACCTCAAGTCTTGTTGAGTCACTAACAACCCTAATTTGGGTAGCTTCTGCCCAGCATGCTGCCATAAACTTTGGACAATATGCATACAATGGATACCCTCCAAATAGGCCTACATTGTGTAAGAAATTTGTCCCAATGGAAGGTACAATCCAGTTTGGTGAGTTTCTGAAGGACCCAGACAAATACTTCCTAAAGATGTTGCCAAATAGGTTTGAGATGAGCCTTGTTGTAGCATTGTTTGATGTGCTCTCAAGGCACACCTCTGATGAGGTCTACTTGGGGTGCCAGCTGTCACCTGGTTGGATAGACAGTGAATCTATTCAAAATAGGTTTGCAGAGTTTAAGGAAGAATTGAAAGAGATTCAGGCAAGGATCTTGGAAAGAAATAGAGATCCTAAGCTTAAGAACAGGCGTGGACCAGCAAAGATTGACTACACTCTCTTATATCCTGACACCTCTAGTTCTTGGTCTAGAACAGCACTCACTTGCAGAGGGATTCCTAATAGCATTTCAATTTAA 2529 0.395 MEGLKRVSSMKRCSNVVKTKIVNNLNPICHAGQQLTLKGKFFITLTQDQRKSIPGKFISVQIYSGTEVDPITGKGKLSEKAVLKHDGTKKHDNGDAKTMIYKIRINVYSHFGTPRAFLIQNRYKKRFFLQSASIETCNNHIIHFDCNSWVYPIKKTKSDRLFFSNACYIPSETPRALMELRKEELERLRGESDVNSESEERKEWGRIYEYDCYNDLSDPEKGPEYLRPILGASWLYPYPRRLRTARKPSASGPANESRPRNFEIYVPSDERFSPNKMKELKSNSIHALAHFLSPKALHQQCSKSFESFEDILDLFSASRNQRIEGWVRDNLNKMLPIQNLEEIIRLIKNKPLELPIPEILSENAWVWKDDIEFGRQMLAGTHPIKIQCLKTFPTQSSINPSFIEQRLEGWTLPQALKHGRLFMLDHHDYLYPFLNRININGVCAYASRTFLFLRSDGMLKPMAIELSLPGSSLSKGISRVFFPAKQGIEAALWQLAKAHVQANDTVYHQLISHWLHTHAVVEPFIIATKRRLSVMHPIHRLLNPHFKDTMHINALARIILINSGGVLERTLSSGEISMQLSSELYKEGMAIKDENNPSGVQLLLQDYPYAIDGLEIWVAIKKWVKDFCSFYYKDDESIRSDVELQSWWSEIRTIGHGDKHNETWWYQIDTTSSLVESLTTLIWVASAQHAAINFGQYAYNGYPPNRPTLCKKFVPMEGTIQFGEFLKDPDKYFLKMLPNRFEMSLVVALFDVLSRHTSDEVYLGCQLSPGWIDSESIQNRFAEFKEELKEIQARILERNRDPKLKNRRGPAKIDYTLLYPDTSSSWSRTALTCRGIPNSISI 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00640 842 ProSitePatterns Lipoxygenases iron-binding region signature 1. 508 522 IPR020833 GO:0016702|GO:0046872
Adu09g00640 842 Pfam Lipoxygenase 177 820 IPR013819 GO:0016702|GO:0046872
Adu09g00640 842 ProSitePatterns Lipoxygenases iron-binding region signature 2. 535 545 IPR020834 GO:0016702|GO:0046872
Adu09g00640 842 Gene3D - 276 364 IPR027433 -
Adu09g00640 842 Gene3D - 366 485 - -
Adu09g00640 842 SMART LH2_4 37 165 IPR001024 GO:0005515
Adu09g00640 842 PANTHER LIPOXYGENASE 92 840 IPR000907 GO:0016702|GO:0046872
Adu09g00640 842 PANTHER LIPOXYGENASE 92 840 - -
Adu09g00640 842 Gene3D - 486 841 - -
Adu09g00640 842 PRINTS Plant lipoxygenase signature 134 152 IPR001246 GO:0016491
Adu09g00640 842 PRINTS Plant lipoxygenase signature 750 764 IPR001246 GO:0016491
Adu09g00640 842 PRINTS Plant lipoxygenase signature 445 469 IPR001246 GO:0016491
Adu09g00640 842 PRINTS Plant lipoxygenase signature 204 220 IPR001246 GO:0016491
Adu09g00640 842 PRINTS Plant lipoxygenase signature 302 323 IPR001246 GO:0016491
Adu09g00640 842 PRINTS Plant lipoxygenase signature 237 256 IPR001246 GO:0016491
Adu09g00640 842 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 168 IPR036392 GO:0005515
Adu09g00640 842 SUPERFAMILY Lipoxigenase 169 842 IPR036226 -
Adu09g00640 842 Coils Coil 774 801 - -
Adu09g00640 842 PRINTS Lipoxygenase signature 528 548 IPR013819 GO:0016702|GO:0046872
Adu09g00640 842 PRINTS Lipoxygenase signature 490 507 IPR013819 GO:0016702|GO:0046872
Adu09g00640 842 PRINTS Lipoxygenase signature 508 525 IPR013819 GO:0016702|GO:0046872
Adu09g00640 842 Gene3D PLAT/LH2 domain 4 168 - -
Adu09g00640 842 Gene3D - 169 274 - -
Adu09g00640 842 ProSiteProfiles PLAT domain profile. 39 164 IPR001024 GO:0005515
Adu09g00640 842 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 167 842 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00640 Adu-Chr9 8255320 8266337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00640 2 842 Acyl Lipid Metabolism Gene Families AT3G22400 42.857 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00640 K00454 - gmx:100793997 1253.81