Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00613 ATGGCGACGGCCAACCCTTTCGATTTGTTAGGTGACGACGCCGAGGACCCCTCGCAGCAACTCGCCGCCGCGGAAGCTATGGCTGCTGCGGTGGCTCCACCCAAGAAGGGTTCAGCTGCGGCGGCGGCTCAGCAGCAGAAGCCGCCAGCTCAGTTGCCTTCTAAGCCTGTTCCTCCTTCTCAGGCTGTGAGGGATGCAAAAAATGAATCATCTCGTGGTGGTCGTGGTGGTGGAGGTGGAAGAGGAGGAGGTGGAAGAGGATATGGACGTGGTCGTGGTGGCCCTGGATTTAACCGTGACTCTCCAAGTGATGATAACTCATTCCCTGCTGCTGGAGGCCCTGCAAACCAAGTTGCCTTTGAAGGAGATGATGGGAGGCCTTCAGAAAGACGTGGCTATGGTGTTGGGAGGCCTTATCGTGTTGGTGGTCGTCGTGGAGGTTTCAGCAATGGCGAAGCTGGCGAAGAAGGGCGTCCACGAAGACTTGAACGCCGCAGTGGGACAGGCCGCGGCAATGAACTTAAACGTGAAGGCTCTGGGCGTGGTAACTGGGGAACCCCTGCTGATGAAATTGCTCCGGTGACTGAGGAGGGAGTGAATGAAACTGAAAAGATTGTGGGCGAGGAGATCCCTGCTGGCGAGGGAGCTGCAGAAGATGCAAACAAGGACAGTGCTGCCAATGAAGCTGTAGAAAAGGAGCCGGAGGAGAAGGAGATGACATTGGAGGAATATGAGAAGGTGCTGGAAGAGAAACGGAAGGCATTCCAAGCGCTCAAAACTGAGGAGAGAAAGGTGGATATTAAGGAATTTGAATCCATGCAGCCACTGTCAAGCAAGAAAGACAACCATGACATCTTCATTAAGTTGGGATCGGACAAGGATAAGCGCAAAGATGCTTTGGAGAAGGAGGAGAAATCCAAGAAGTCTGTCAGCATCAACGAGTTTCTGAAGCCTGCTGAAGGAGAAAGGTACTACAACCCAGGCGGACGTGGCAGACGTGGCCAAGGTTCTAGAGGTTATGGTGGAAATGCTGGCAGCAACGCCCAGGCCCCGTCGATTGCAGATCCTGGGCACTTCCCAACCTTGGGTGGCAAGTGA 1098 0.5437 MATANPFDLLGDDAEDPSQQLAAAEAMAAAVAPPKKGSAAAAAQQQKPPAQLPSKPVPPSQAVRDAKNESSRGGRGGGGGRGGGGRGYGRGRGGPGFNRDSPSDDNSFPAAGGPANQVAFEGDDGRPSERRGYGVGRPYRVGGRRGGFSNGEAGEEGRPRRLERRSGTGRGNELKREGSGRGNWGTPADEIAPVTEEGVNETEKIVGEEIPAGEGAAEDANKDSAANEAVEKEPEEKEMTLEEYEKVLEEKRKAFQALKTEERKVDIKEFESMQPLSSKKDNHDIFIKLGSDKDKRKDALEKEEKSKKSVSINEFLKPAEGERYYNPGGRGRRGQGSRGYGGNAGSNAQAPSIADPGHFPTLGGK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00613 365 Pfam Hyaluronan / mRNA binding family 160 265 IPR006861 -
Adu09g00613 365 Coils Coil 241 264 - -
Adu09g00613 365 Gene3D - 156 269 - -
Adu09g00613 365 MobiDBLite consensus disorder prediction 288 311 - -
Adu09g00613 365 MobiDBLite consensus disorder prediction 288 365 - -
Adu09g00613 365 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 365 - -
Adu09g00613 365 MobiDBLite consensus disorder prediction 1 240 - -
Adu09g00613 365 Pfam Stm1 1 77 IPR019084 -
Adu09g00613 365 MobiDBLite consensus disorder prediction 224 240 - -
Adu09g00613 365 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 365 IPR039764 GO:0003723
Adu09g00613 365 SMART HABP4_PAI_RBP1_2 158 266 IPR006861 -
Adu09g00613 365 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00613 Adu-Chr9 7854610 7858461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00613 K13199 - gmx:100807657 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00613 09 7854610 7858461 Adu09g00613 09 7854610 7858461 ECH
Adu09g00613 09 7854610 7858461 Adu04g02685 04 114310845 114314849 PCT