Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00611 ATGAATCCCGAGTATGATTATCTGTTCAAGCTCCTTCTTATTGGAGACTCTGGTGTTGGCAAATCATGTCTTCTTCTGAGATTTGCTGATGATTCATACATTGAGAGCTACATTAGCACCATCGGAGTTGATTTTAAAATACGAACTGTTGAGCAGGATGGGAAGACGATTAAACTTCAGATTTGGGATACTGCTGGACAAGAACGGTTTAGAACAATAACCAGTAGCTACTATCGTGGGGCACATGGAATCATTATTGTTTATGATGTGACAGATGAAGAGAGCTTCAATAATGTGAAGCAGTGGCTCAGTGAAATCGATCGCTATGCTAGTGACAACGTCAACAAACTCTTAGTTGGAAACAAGAGTGATCTGACAGCAAATAGAGTTGTCTCATATGAAACAGCCAAAGCATTCGCGGACGAAATAGGCATTCCTTTTATGGAAACTAGTGCAAAAGACTCTACAAATGTCGAACAAGCATTCATGGCCATGTCTGCCTCCATCAAGAATAGAATGGCGAGCCAACCAGCCGCAAACAATGCAAGGCCTCCCACGGTACAAATCAAAGGACAGCCAGTTGGACAGAAAAGTGGGTGTTGCTCTTCCTAG 612 0.4248 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTANRVVSYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMSASIKNRMASQPAANNARPPTVQIKGQPVGQKSGCCSS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00611 203 ProSiteProfiles small GTPase Rab1 family profile. 4 203 - -
Adu09g00611 203 Gene3D - 2 197 IPR027417 -
Adu09g00611 203 PANTHER RAS-RELATED PROTEIN RABD2A-LIKE 6 202 - -
Adu09g00611 203 TIGRFAM small_GTP: small GTP-binding protein domain 7 164 IPR005225 GO:0005525
Adu09g00611 203 ProSiteProfiles small GTPase Ras family profile. 1 203 IPR001806 GO:0003924|GO:0005525
Adu09g00611 203 Pfam Ras family 10 169 IPR001806 GO:0003924|GO:0005525
Adu09g00611 203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 188 IPR027417 -
Adu09g00611 203 PANTHER LD21953P-RELATED 6 202 - -
Adu09g00611 203 SMART rab_sub_5 9 172 - -
Adu09g00611 203 CDD Rab1_Ypt1 7 172 - -
Adu09g00611 203 ProSiteProfiles small GTPase Arf family profile. 2 169 - -
Adu09g00611 203 PRINTS Transforming protein P21 ras signature 9 30 - -
Adu09g00611 203 PRINTS Transforming protein P21 ras signature 32 48 - -
Adu09g00611 203 PRINTS Transforming protein P21 ras signature 50 72 - -
Adu09g00611 203 PRINTS Transforming protein P21 ras signature 112 125 - -
Adu09g00611 203 PRINTS Transforming protein P21 ras signature 147 169 - -
Adu09g00611 203 SMART ras_sub_4 6 172 - -
Adu09g00611 203 SMART rho_sub_3 11 171 IPR001806 GO:0003924|GO:0005525
Adu09g00611 203 ProSiteProfiles small GTPase Rho family profile. 2 174 - -
Adu09g00611 203 MobiDBLite consensus disorder prediction 174 203 - -
Adu09g00611 203 SMART arf_sub_2 1 173 - -
Adu09g00611 203 SMART ran_sub_2 14 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00611 Adu-Chr9 7844079 7846635 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00611 K07874 - gmx:100306147 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00611 09 7844079 7846635 Adu09g00611 09 7844079 7846635 ECH
Adu09g00611 09 7844079 7846635 Adu04g02684 04 114305070 114308124 PCT