Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00595 ATGAGCAGTTCCCATGTGTTGACTCAGCCACAGCAGCCAACCACTCAAGAGGCACTTACTTCACTCAACTACTTCAATCACCTCTTACGCATTTCGTCGAACACCTCACCCACCGGAGCTGCTTCCAGGGCTGCTGGACGCAACCGCCGTGCCCCGGCGTCTCCGACCACTTCGACTTCCGATAGGGAGGCTGTTCGAGCCATTCGCTTGAAGAAGGTTGAAGAACTGAGAAGTAAAGGGCTTGATCCATATGCTTATGGATGGGAGAAAACTCACAGTGCTAATCAGCTGCAAGATATATATAGAGATCTGGGAAATGGTGAGGAAGCAAACGGTGAGAATGACCATGTATCAATTGCAGGAAGAATTGTTGCTAGAAGAGCATTTGGCAAGCTTGCTTTTTTGACACTAAGAGATGATTCTGGGACAATTCAGCTCTATTGTGATAAGGAGAGACTCATAGATGACCAGTTTGAACAGTTGAAAGCTCATGTTGATATTGGTGATATACTAGGTGCAAGAGGTTCAATAAAACGCACAGAGAAAGGAGAACTTTCTGTGTGTGTCCTTTCCTTTGCAATCCTTACAAAATCTCTGCTTCCACTACCTGACAAATATCATGGCTTAACTGATATCGATAAACGCTATCGCCAAAGATACGTAGATATGATTGCAAATCCAGAGGTAGCAGATGTTTTCCGCAAAAGAGCAAAGGTTGTATCAGAGATACGGAGAACAATGGATTCTTTAGGTTACATTGAAGTTGAAACCCCAGTTTTGCAGGGAGCAGCTGGGGGAGCCGAAGCCAGACCATTTATTACACATCATAATTCTCTTGGAAGGGACTTATATTTGAGAATTGCAACTGAATTACATCTGAAGAGAATGCTGGTTGGTGGATTTGAAAAGGTATATGAGATTGGGCGAATATTTAGAAATGAAGGAATTTCAACTCGTCATAATCCTGAATTTACCACAATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTGGCAGAGGAGATTGTCACTCAATGTGCCCTAGCAGTTCTTGGGAAACTTACCCTAGATTATCAGGGAGTTGAGATATGTCTGGAGAGACCTTGGAGGAGGGAGACCATGCACAACCTTGTTAAAGAAGTTTCCGGCATTGATTTTAGTGAATTGGGAGATGATCTTGAAGTTGCAAAGAAAGTTACTCTTAGTACCCTTGGAAACAATCTTGATGCCAAGGACAAAGCTTCGATTGAAGCTTGCCAATCTGTTGGCCATCTACTTAATGAGGTCTTTGAGGTTGTTGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTATCCAATTGAAATATCTCCACTGGCCAAACCACACCGAAGATCCATAGGTTTGACTGAGAGATTTGAGCTATTCATTTGTGGCCGTGAGCTAGGCAATGCATTCTCGGAACTGACTCAGACTCCCCCAAGAAACTAA 1488 0.4308 MSSSHVLTQPQQPTTQEALTSLNYFNHLLRISSNTSPTGAASRAAGRNRRAPASPTTSTSDREAVRAIRLKKVEELRSKGLDPYAYGWEKTHSANQLQDIYRDLGNGEEANGENDHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCDKERLIDDQFEQLKAHVDIGDILGARGSIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGYIEVETPVLQGAAGGAEARPFITHHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVLGKLTLDYQGVEICLERPWRRETMHNLVKEVSGIDFSELGDDLEVAKKVTLSTLGNNLDAKDKASIEACQSVGHLLNEVFEVVVEPKLIQPTFVLDYPIEISPLAKPHRRSIGLTERFELFICGRELGNAFSELTQTPPRN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00595 495 Gene3D Bira Bifunctional Protein; Domain 2 205 493 IPR045864 -
Adu09g00595 495 CDD LysRS_N 116 223 IPR044136 GO:0000166
Adu09g00595 495 PANTHER LYSYL-TRNA SYNTHETASE 48 490 - -
Adu09g00595 495 SUPERFAMILY Nucleic acid-binding proteins 63 204 IPR012340 -
Adu09g00595 495 Pfam tRNA synthetases class II (D, K and N) 213 489 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Adu09g00595 495 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 233 484 IPR006195 -
Adu09g00595 495 PANTHER LYSINE--TRNA LIGASE 48 490 - -
Adu09g00595 495 TIGRFAM lysS_bact: lysine--tRNA ligase 67 490 IPR002313 GO:0004824|GO:0005524|GO:0006430
Adu09g00595 495 MobiDBLite consensus disorder prediction 33 63 - -
Adu09g00595 495 PRINTS Lysyl-tRNA synthetase signature 248 258 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Adu09g00595 495 PRINTS Lysyl-tRNA synthetase signature 311 328 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Adu09g00595 495 PRINTS Lysyl-tRNA synthetase signature 293 306 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Adu09g00595 495 PRINTS Lysyl-tRNA synthetase signature 264 280 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Adu09g00595 495 PRINTS Lysyl-tRNA synthetase signature 444 460 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
Adu09g00595 495 Gene3D - 62 203 IPR012340 -
Adu09g00595 495 SUPERFAMILY Class II aaRS and biotin synthetases 211 490 IPR045864 -
Adu09g00595 495 Pfam OB-fold nucleic acid binding domain 117 191 IPR004365 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00595 Adu-Chr9 7562545 7569047 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00595 K04567 - gmx:100787720 811.601