Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00498 ATGTATCGATTAGCTTCCAAGCTAGCCTCCTCCATCACTTCCTCAACCTCAAAGAACGTTATACGCTGCAGGGTTATTTCAAGTAGAAACTATGCGAGCAAAGACATCAACTTTGGCGTCGGAGCTCGTGCTGCAATTCTTCAGGGTGTCACTGAGGTTGCTGATGCTGTCAAGGTTACGATGGGACCTAAGGGTCGTAATGTGATTATTGAGAAAAGTTATGGGAACCCAAGGATCACAAAGGATGGTGTGACAGTAGCTAAGAGTATCAAATTTCAGGATAAGGCTAAGAACATTGGTGCTGATCTTGTTAAGCAGGTTGCCAAGGCTACCAACGCTGCTGCTGGAGATGGTACAACTTGTGCGACTGTGTTAACTCAGGCAATACTGATAGAAGGTTGCAAATCGATTGCAGCTGGTGTAAATGTCATGGATTTGCGCAATGGAATAAATAAGGCAGTTGATGCTGTAATTACTGATTTGAAAAGCAGGGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGGTTGGGACTATATCTGCAAATGGAGAGAGAGACATTGGTGAATTGATTGCAAAGGCAATGGAAAAAGTTGGAAAGGAAGGAGTTATTACCGTTGCTGATGGAAACACTTTGGACAATGAGTTGGAAGTTGTTGAAGGAATGAAGTTGGGCAGAGGCTATATATCTCCCTATTTTATTACTGATCAGAAAACCCAGAAATGTGAATTGGATCACCCCCTTATCCTCATCCATGACAAGAAAATTTCAGACATGAATTCATTATTGAAAATATTGGAACTGTCAGTTGAGAAAAAAAGACCGCTCTTGGTTGTAGCAGAAGATGTTGAGAGTGATGCATTGGCTATGCTCATACTAAACAAGCATCATGCTGGGCTTAAGGTTTGTGCTATAAAAGCTCCTGGTTTCGGTGATAACAGAAAAGCAAATCTAGATGATCTTGCAATTCTTACTGGAGGAGAGGTCATCACAGAAGAGCGTGGTTTTACTCTTGACAAAGTCCTACCAGAAATGCTTGGTACTGCCAAAAAGGTTACTATCTCCATTGATGACACTATCATTCTACATGGAGGTGGGGATAAGAAACTCATTGAAGAGAGATGTGAGGAGCTTAGGACAGCAATGAACAAGAGTTCTGCCACGTTCGATAAAGAAAAAGCACAAGAACGCCTATCAAAACTATCCGGTGGTGTAGCTGTCTTCAAGGTTGGAGGCGCTAGTGAGGCAGAAGTTGGGGAAAGGAAAGATCGGGTGACAGATGCCCTAAATGCCACTAAAGCAGCAGTCGAGGAGGGAATTGTTCCAGGTGGTGGAGTTGCTCTCTTATATGCTACAAAAGTGTTGGAGAACCTCGAAACAAAGAACGAGGATGAGAAAAGAGGAGTACAGATTATTCAGAATGCACTTAAGGCACCTACCCTTACAATAGCTTCAAATGCTGGTTTCGATGGCACTTTGGTTCAGAGCAAATTGTTAGAACAAGACAATCATAATTTGGGTTTTGATGCTTCCAAAGCAGGTGCCTATGTTGATATGATAAAGGCTGGAATCATAGATCCTGTTAAAGTTGTTAGAACAGCTTTGGTAGATGCTGCCAGTGTCTCATTGCTACTGACAACAACGGAGGCAGCTATTGTGGATAATCCAAAGGACAAAAATAAAGCTCCCAGCCGGtgcgtagatgttgacagtagagacgttcttgatgcgtggatgaaggcactcccaaccaaattttatactcctggtaagccattccctttgttccaccgattaaagggtatattcggaaaggatcgagccacgggtgcaggtgcagtcagtggTTTTGACGCACAGGAGCAAGTTCAAGAGGAGGAGGAAAATCATTGTCCAAGTTTGGACGATTTTGGAATGTCAGCAAATGTAAGTTTTCATGAAGGACAAGGAGCAGGTTCACACTCTGATGCTTGTGCAGCTAGCAGAAGGCATTCGGGAAAGAAGCGGAAGCAAAATGATATTCTAGAGAGGATGGTTGAACAGGTGCAATTTTCGACTGCTGAACAAGGAAGGAATGCCCAAGTTCTTGCTGATGCTATATCTGGGGTGAATGAGAAGTTCATGGTCAGTGAGAAGCTTGAACAGCTTGGATTCGATAACGATGAGGTTGTGCAGGTTGCAGTGAAGTTTGCTAATAATGCACAGATGGAGAAGGTTTTCTGGGGTTTGAAGGATTCTTAG 2244 0.3993 MYRLASKLASSITSSTSKNVIRCRVISSRNYASKDINFGVGARAAILQGVTEVADAVKVTMGPKGRNVIIEKSYGNPRITKDGVTVAKSIKFQDKAKNIGADLVKQVAKATNAAAGDGTTCATVLTQAILIEGCKSIAAGVNVMDLRNGINKAVDAVITDLKSRAVMISTPEEITQVGTISANGERDIGELIAKAMEKVGKEGVITVADGNTLDNELEVVEGMKLGRGYISPYFITDQKTQKCELDHPLILIHDKKISDMNSLLKILELSVEKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAIKAPGFGDNRKANLDDLAILTGGEVITEERGFTLDKVLPEMLGTAKKVTISIDDTIILHGGGDKKLIEERCEELRTAMNKSSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVGERKDRVTDALNATKAAVEEGIVPGGGVALLYATKVLENLETKNEDEKRGVQIIQNALKAPTLTIASNAGFDGTLVQSKLLEQDNHNLGFDASKAGAYVDMIKAGIIDPVKVVRTALVDAASVSLLLTTTEAAIVDNPKDKNKAPSRCVDVDSRDVLDAWMKALPTKFYTPGKPFPLFHRLKGIFGKDRATGAGAVSGFDAQEQVQEEEENHCPSLDDFGMSANVSFHEGQGAGSHSDACAASRRHSGKKRKQNDILERMVEQVQFSTAEQGRNAQVLADAISGVNEKFMVSEKLEQLGFDNDEVVQVAVKFANNAQMEKVFWGLKDS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00498 747 MobiDBLite consensus disorder prediction 649 671 - -
Adu09g00498 747 SUPERFAMILY GroEL apical domain-like 214 406 IPR027409 -
Adu09g00498 747 SUPERFAMILY GroEL equatorial domain-like 37 553 IPR027413 -
Adu09g00498 747 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 Pfam TCP-1/cpn60 chaperonin family 53 556 IPR002423 GO:0005524
Adu09g00498 747 CDD GroEL 34 555 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 20 568 - -
Adu09g00498 747 TIGRFAM GroEL: chaperonin GroL 33 558 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Adu09g00498 747 SUPERFAMILY GroEL-intermediate domain like 168 234 IPR027410 -
Adu09g00498 747 Coils Coil 456 476 - -
Adu09g00498 747 Gene3D - 36 554 IPR027413 -
Adu09g00498 747 Gene3D - 167 440 IPR027410 -
Adu09g00498 747 Gene3D GroEL 222 403 IPR027409 -
Adu09g00498 747 Hamap Chaperonin GroEL [groEL]. 32 618 IPR001844 GO:0042026|GO:0140662
Adu09g00498 747 PANTHER CHAPERONIN CPN60-2, MITOCHONDRIAL-LIKE 20 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00498 Adu-Chr9 6152690 6160212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00498 K04077 - gmx:100778935 959.133