Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00379 ATGTGTTCCTCTTTCAAGTGCTTCTACTTCCACTTACTCCCTATTTTCTATTTCCTTATTATTATTGCTGCCACAACAACCGAATTCAAGTTTCTTGATTCAGCTAAGAGTCCTGAGGTTTTTGATTGGATGGTGAACATCAGGAGGAAGATTCATGAGAATCCGGAATTGGGGTATCAGGAATTTGAGACCAGTGAGGTCATAAGAGCAGAGTTGGACAAATTGGGAATTTCATATAAGCATCCAATTGCTGAAACCGGTGTCATTGGATACATTGGAACTCGAAAACCTCCTTTTGTTGCTCTAAGAGCTGACATGGATGCTCTTGCTTTACAGGAAATGGTGGATTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCATGTGGTCATGATGCTCATGTTGCTATGCTTCTCGGTGCTGCAATGATCCTCAAACAAAATGAAAAGGAGATAAAAGGAACTGTTATTCTTGTTTTCCAACCTGCTGAGGAAGGGGGTGCAGGGGCTAAGAAAATTGTAGAATCCGGAGTCTTAGAAAATGTTAATGCTATCTTTGGATTGCATATCACAGGAAAGTTTCTAATAGGCGAAGTAGCTTCTCGGTCTGGTCTCATGTATGCAAATTCTGGTTTCTTTGAAGCAATGATAAGTGGAAAGGGTGGTCATGCAGCTATTCCTCAACATTCTATAGACCCCATATTGGCAGTTTCTAATGTAATTGTTAGCTTACAGCACCTTATTTCGCGCGAAGCTGATCCTCTTGACTCCCAGGTTGTGACAGTAGGAAAAGTCGAAGGAGGCAGCGCTTTCAATATTATTCCCGATACTGTCACGATTGGTGGCACCTTCCGGGCATTTTCAAAAGAAGGCTTCAGGCAACTGCAGCAGCGTATTGAGCAGGTTATTATTGGCCAAGCCACCGTCCATAGGTGTAACGCAACAGTAGACTTCCTTCAAGAAGAGAAACCTTTCTACCCTGCAACCATAAACAATGGTGACTTGCACAAGCATTTTCTTGACATTGCCACAAAGTCTCTTGGCATCCAAAAATTTAATGAGATGCGACCGTCAATGGGAGCCGAAGACTTCTCGTTCTATCAAGAGGTTATACCTGGATACTACTTCGTGCTTGGAATGCAGAACGCGTCGCACGAACGGCTTGCCGGCGCACACTCACCTTATTATAAAGTCAATGAAGATGCATGA 1212 0.4323 MCSSFKCFYFHLLPIFYFLIIIAATTTEFKFLDSAKSPEVFDWMVNIRRKIHENPELGYQEFETSEVIRAELDKLGISYKHPIAETGVIGYIGTRKPPFVALRADMDALALQEMVDWEHKSKVPGKMHACGHDAHVAMLLGAAMILKQNEKEIKGTVILVFQPAEEGGAGAKKIVESGVLENVNAIFGLHITGKFLIGEVASRSGLMYANSGFFEAMISGKGGHAAIPQHSIDPILAVSNVIVSLQHLISREADPLDSQVVTVGKVEGGSAFNIIPDTVTIGGTFRAFSKEGFRQLQQRIEQVIIGQATVHRCNATVDFLQEEKPFYPATINNGDLHKHFLDIATKSLGIQKFNEMRPSMGAEDFSFYQEVIPGYYFVLGMQNASHERLAGAHSPYYKVNEDA 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00379 403 SUPERFAMILY Bacterial exopeptidase dimerisation domain 211 328 IPR036264 -
Adu09g00379 403 PANTHER AUXIN CONJUGATE HYDROLASE 17 403 - -
Adu09g00379 403 Gene3D - 209 327 - -
Adu09g00379 403 Gene3D Zn peptidases 44 403 - -
Adu09g00379 403 SUPERFAMILY Zn-dependent exopeptidases 39 403 - -
Adu09g00379 403 CDD M20_IAA_Hyd 44 403 IPR044757 GO:0009850|GO:0016787
Adu09g00379 403 Pfam Peptidase family M20/M25/M40 101 400 IPR002933 GO:0016787
Adu09g00379 403 PIRSF Amidohydrol_AmhX 30 403 IPR017439 GO:0016787
Adu09g00379 403 Pfam Peptidase dimerisation domain 203 304 IPR011650 -
Adu09g00379 403 PANTHER PEPTIDASE M20 FAMILY MEMBER 17 403 IPR017439 GO:0016787
Adu09g00379 403 TIGRFAM amidohydrolases: amidohydrolase 44 403 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00379 Adu-Chr9 4238214 4241282 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00379 K21604 K14664 gmx:100789077 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00379 09 4238214 4241282 Adu09g00379 09 4238214 4241282 ECH
Adu07g01752 07 52676842 52680038 Adu09g00379 09 4238214 4241282 PCT