Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00339 ATGGCCACTCCCATTGGAAAAGGGAATTGTTCATTGAACCTTTTCCTACGAAATTGGAGAAACCTTTGCTTCCATTTCCATCGATTCTCAACTTCTTCCATCGAGTCTTCTTCTCCCTTACCCTTCAAATCCATCACTTCCACTATTAGGACCAAGCCAAGTAAGAGGATTCCCAATAACAGTTCCTTCTTCATACCCATTCCTCATCAAACCATTCCTCAAGCCAAAGGCCAAGACCTTGATTTCATTAACGTTTCCCACAGCCACATAATTCACTCTCAGTGGGAAAATCTCCAACCTTTCTCACATTCCCTCACACCCTTCAGGGTCAAACACATCCTCCTCAAGCTCAAAAATGACGCCGTTCTCTCCCTCAAATTTTCCAACTGGGTCCAAAACCAAAACCCTAGTTGCCACTCCCTTGAAACACATGCCATCTTACTCCATACTCTTGCCAAAAACCGAAACTTTAGAGCCATTCAAACGCTCCTCAAGAGGATCATCGCTGATTCAGGCGCTTTGGATTTGGATTTGCCTTCTAAGCTCTTTGAATCATTGTTGTGTTCTTACCGTTTGTGTGATTCCACCCCTCTTGTTTTTGATGCGCTTTTCAAGACTTTTGCGCATTTGAATAAGATTAGGAATGCCACTAACACGTTTTGCCGCATGAAGGAGTATGGGTTCTTCCCCACTGTTGAGTCCTGCAATGCTTTCATGAGTTCTCTGATTCATTTGCAGAGGCCTGAGGTAGCTTTGTTGTTCTACTGCGAGATGCGTAGGTCTTGTGTTTCGATCAACGTATACACTGTTAACATGGTTATATGTGCTTATTGCAAGTTAGGGGAGTTGCAGAAGGGTTTTGAGGTGTTGGAGAAGATGAGGGACATGGGTTTGAGTCCAAATGTTGTGTCGTTTAATGCATTGATTTCAGGGTATTGTAATAAGGGTATGGTTAGTTTGGCATTGAAGGTTAAGTCCTTGATGGAGCATAATGGGGTGCAACCAAATGTGGTTACTTTTAACACCATCATCAATGGGTTCTGCAAGGAGAGGAAGTTGCATGAGGCTAACAAGGTTTTCAATGAGATGAAGGGTTGCAATGTGGCTGCTAATATTGTGACATACAATACTTTGATCAATGGGTATAGTTCAGTTGGGAACAGCGAAATGGGGACAAGGCTTTATGAGGAGATGAGGAGGGATGGGATTAAGGCTGATATACTGACTTATAATGCATTGATTTTGGGATTGTGTAAGGAGGGGAAAACGAAAAAGGCTGCGTATCTGGTTAAGGAACTTGATAAGGAGAACTTGGTCCCGAATGCGTCAACCTTTTCAGCACTGATCACCGGGCAGTGTGCGAGAAAGAACTCTGAGCGTGCCTTTCTTATTTATAGGAGCATGATAAGGAGTGGTTGTAATCCGAATGAGCATACGTTCAAGATGTTGATGTCTGCTTTCTTGCATAATGAAGACTTTGATGGTGCTGTGCAGGTCTTGAGGGACATGTTGGGCAGGTCGATGGCTCCTGATTCTCTTGTCTTGTCTGAGCTCTGTGGTGGACTTTGTAGAACTGAACTTATCAGGCACAAGCAGAGGATGAGATAG 1608 0.4359 MATPIGKGNCSLNLFLRNWRNLCFHFHRFSTSSIESSSPLPFKSITSTIRTKPSKRIPNNSSFFIPIPHQTIPQAKGQDLDFINVSHSHIIHSQWENLQPFSHSLTPFRVKHILLKLKNDAVLSLKFSNWVQNQNPSCHSLETHAILLHTLAKNRNFRAIQTLLKRIIADSGALDLDLPSKLFESLLCSYRLCDSTPLVFDALFKTFAHLNKIRNATNTFCRMKEYGFFPTVESCNAFMSSLIHLQRPEVALLFYCEMRRSCVSINVYTVNMVICAYCKLGELQKGFEVLEKMRDMGLSPNVVSFNALISGYCNKGMVSLALKVKSLMEHNGVQPNVVTFNTIINGFCKERKLHEANKVFNEMKGCNVAANIVTYNTLINGYSSVGNSEMGTRLYEEMRRDGIKADILTYNALILGLCKEGKTKKAAYLVKELDKENLVPNASTFSALITGQCARKNSERAFLIYRSMIRSGCNPNEHTFKMLMSAFLHNEDFDGAVQVLRDMLGRSMAPDSLVLSELCGGLCRTELIRHKQRMR 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00339 535 Gene3D Tetratricopeptide repeat domain 85 228 IPR011990 GO:0005515
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 371 405 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 266 300 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 336 370 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 301 335 IPR002885 -
Adu09g00339 535 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 44 525 - -
Adu09g00339 535 Pfam PPR repeat family 300 348 IPR002885 -
Adu09g00339 535 Pfam PPR repeat family 230 279 IPR002885 -
Adu09g00339 535 Pfam PPR repeat family 447 487 IPR002885 -
Adu09g00339 535 Pfam PPR repeat family 371 419 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 441 475 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 476 510 IPR002885 -
Adu09g00339 535 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 406 440 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 268 302 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 338 371 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 303 337 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 409 442 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 234 266 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 373 406 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 444 477 IPR002885 -
Adu09g00339 535 TIGRFAM PPR: pentatricopeptide repeat domain 478 511 IPR002885 -
Adu09g00339 535 PANTHER ATPASE EXPRESSION PROTEIN 3 44 525 - -
Adu09g00339 535 Gene3D Tetratricopeptide repeat domain 245 393 IPR011990 GO:0005515
Adu09g00339 535 Gene3D Tetratricopeptide repeat domain 394 535 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00339 66 534 Glycosyltransferase AT1G05670 27.883 2.45e-67 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00339 - - adu:107464028 1055.05