Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00315 ATGGAGAGAAGCCAACCAAGGAGGCAAGTTGCTGCCATGAAACAATCCCTTTTTGATCAGGGATTATTGGATGAACAATTTATCCAGTTGGAAGAATTATCAGATGATGCTAATCCAAACTTTGTTGAAGAAATTGTCACCCTTTATTACCGTGATTCATCTCGCCTTATCTCAAGCATAGAGCAAGCACTGAAGGAGAGACACACATTGGATTTCAACAAACTGGACACACTTATGCATCAGTTCAAAGGAAGCAGTTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCACTCTCTTTAGGGAATATTGTAGGACAGGAAATGCTGAAGGATGCATGAAGACCTTCCAACAATTGAAGAAAGAATATGCTTCACTTAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCTAGGCAAGCCGGACCCATGGAGACAGCATATTCTGCTTCTTCCAATTCTCCCCGTCGTCTTCACATTCTGCCCTTCCCTCCGCAATCTAGTCAAAACCCTAACCATCAGTATAATCAGAATTGGAGTGGTGGTTATGGTGGTGCTGGTGGTGCTGGTGGAGACCCTTCTACTTCAAATTCATTCCCTCCACAACCTTATAACCAAATGCCCCCAAATTCAAATTTCCATTCTCATGGTGGGGGTGCTGCACCACCACCTCCTCCTCCTTCCCATCACCCCTACCCTTATCCACCACCTCCACCGCCACCACCCGAAAATTCATACCCGCCTCCACCTCCACCACCGCCTTCTTCACATGGTGCTCCTATGTATTACCCTTCTAGTCAATACTCTCAGTATGGGCAGCAGCCACCTCCACCACCTCCCCCTCTGCCTCCATCTTCGCCTCCGCCGAGCAATTCTATCCCACCTCCACCCCCTCCACCTTCCTCGCCGCCTCCTCCTCCTGCTTCAGCTCCTCCCCCGCCGCCACCAAAGGATGAGAGGCGGATGCATAGCCGAGATAAAGGGCCGATAAAGGAAGGTTATGAGCATTCAAATCATGGAAATCCTCATAAACAGCAGAAGCCTTCTGCTGTTCCTCCAATGCCAGGGAAGAAGCCGAACGGGGTGCAGGGGAGGGTTGAGACAGAAGAAGAGAGGAGGTTAAGGAAGAAGAGAGAATTTGAGAAGCAGAGGCAAGAAGAGAAGCATAGGCAGCAGCTGAAGGAATCACAGAACAGTGTCTTGCAGAAGACTCAGATGATGTCATCTGGGAAGGGGCATGGTTCGGGTTCGGTTGCAGGGTCTCGAATGGCAGCAGAGAAGAGAACTACACCCTTATTGAGTGCGGAGAGAATTGAAAATAGGTTGAAAAAGCCAACAACATTTTTGTGCAAAATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCTAAGCTTATGGCGTTCAAGAGGGATAAAGATCAATATACGAAATATACAATCACGTCGCTGGAGAAAATGTACAAACCCAAACTTTTTGTGGAACCAGATCTTGGGATTCCTCTGGACCTGCTTGACCTCAGTGTTTATAACCCTCCCAGTGTCAGACTACCTCTTGCTCCAGAAGACGAAGATTTGTTGCGAGATGATGTTGCGGCTACTCCTATAAAGAAAGACGGCTTAAAAAGAAAAGACAGGCCTACTGATAAAGGTGTAGCTTGGCTTGTGAAAACACAATATATATCTCCCCTCAGCATGGATTCAACAAAACAGTCTTTAACCGAAAAACAAGCTAAGGAGCTGAGAGAGATGAGAGGAGGCCGCAGCATGTTGGACAGTCGTAACAGTAGGTATGCATATACCACAGCTAAGTCACGCCCTGTTCATGCAACCAACAAATCTTTGTATCCTGTTGAGGTTTTGCCTTTGTTACCTGATTTTGATAGGTATGATGAACAGTTTGTTATTGCTGCATTTGATAATGCTCCTACAGCTGATTCAGAAATGTATAGTAAGTTGGACAAATCTGTTCGCGATGCCTGTGAATCAAAGGCACTTATGAAAAGTTATGTTGCAACCGGCTCAGATCCTGCAAATCCTGAGAAATTTTTGGCTTACATGACCCCAACACCTGGACAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCATATTCTTGGGTTCGCGAGTATCACTGGGATGTTCGGGGTGATGATGCAGATGACCCTACAACATTCCTAGTTGCATTTGATGAGTCAGAAGCACGTTATGTGCCTCTTCCAACAAAACTTGTTTTAAGAAAAAAGAGGGCTAAAGAGGGAAGATCAAGTGATGAGGTCGAGCAATTTCCAATACCTGCAAGAGTGACTGTACGGCGGAGGTCAAGTGTTGCAGCAATTGAGCGAAAGGATTCACAGGTTTATACAAGTTCGAAAGCCAGTACATCAAAGAGAAGGGGTCTAGAAATGGATGATGATCTTGAACAGCATCATCGACACAATTATCAATCTAGTGGAGCTGAAGATGACATGTCTGATTAA 2490 0.4546 MERSQPRRQVAAMKQSLFDQGLLDEQFIQLEELSDDANPNFVEEIVTLYYRDSSRLISSIEQALKERHTLDFNKLDTLMHQFKGSSSSIGAKKVKAECTLFREYCRTGNAEGCMKTFQQLKKEYASLRKKLEAYFQLARQAGPMETAYSASSNSPRRLHILPFPPQSSQNPNHQYNQNWSGGYGGAGGAGGDPSTSNSFPPQPYNQMPPNSNFHSHGGGAAPPPPPPSHHPYPYPPPPPPPPENSYPPPPPPPPSSHGAPMYYPSSQYSQYGQQPPPPPPPLPPSSPPPSNSIPPPPPPPSSPPPPPASAPPPPPPKDERRMHSRDKGPIKEGYEHSNHGNPHKQQKPSAVPPMPGKKPNGVQGRVETEEERRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTQMMSSGKGHGSGSVAGSRMAAEKRTTPLLSAERIENRLKKPTTFLCKMKFRNELPDPSAQPKLMAFKRDKDQYTKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRLPLAPEDEDLLRDDVAATPIKKDGLKRKDRPTDKGVAWLVKTQYISPLSMDSTKQSLTEKQAKELREMRGGRSMLDSRNSRYAYTTAKSRPVHATNKSLYPVEVLPLLPDFDRYDEQFVIAAFDNAPTADSEMYSKLDKSVRDACESKALMKSYVATGSDPANPEKFLAYMTPTPGQLSKDIYDENEDVSYSWVREYHWDVRGDDADDPTTFLVAFDESEARYVPLPTKLVLRKKRAKEGRSSDEVEQFPIPARVTVRRRSSVAAIERKDSQVYTSSKASTSKRRGLEMDDDLEQHHRHNYQSSGAEDDMSD 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00315 829 MobiDBLite consensus disorder prediction 271 315 - -
Adu09g00315 829 CDD HPT 42 106 IPR008207 GO:0000160
Adu09g00315 829 Gene3D HPT domain 1 147 IPR036641 GO:0000160
Adu09g00315 829 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 287 828 IPR007133 GO:0006368|GO:0016570|GO:0016593
Adu09g00315 829 MobiDBLite consensus disorder prediction 163 181 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 785 799 - -
Adu09g00315 829 Coils Coil 110 137 - -
Adu09g00315 829 Coils Coil 366 386 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 785 829 - -
Adu09g00315 829 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Adu09g00315 829 Pfam Paf1 448 776 IPR007133 GO:0006368|GO:0016570|GO:0016593
Adu09g00315 829 Pfam Hpt domain 44 128 IPR008207 GO:0000160
Adu09g00315 829 MobiDBLite consensus disorder prediction 395 415 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 363 394 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 800 822 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 146 438 - -
Adu09g00315 829 MobiDBLite consensus disorder prediction 219 259 - -
Adu09g00315 829 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Adu09g00315 829 MobiDBLite consensus disorder prediction 316 342 - -
Adu09g00315 829 PRINTS Proline rich extensin signature 237 254 - -
Adu09g00315 829 PRINTS Proline rich extensin signature 220 236 - -
Adu09g00315 829 PRINTS Proline rich extensin signature 279 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00315 Adu-Chr9 3335661 3344190 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00315 K15174 - gmx:100800148 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00315 09 3335661 3344190 Adu09g00315 09 3335661 3344190 ECH