Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00221 ATGGAAGTTAAAGAAGAAGAAGAAGAAGTGAAGTTCTCAGCGTTCCCTTTCAAGCCATATTCGATTCAGATGGAATTCATGAAGGCTCTTTATCACTCTCTCAACCAAGGTGGCGTCTCCATGTTAGAAAGCCCTACTGATGTGCTTTCACTTGGAAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAAGCTACTAGAGTGAAGAACATAAGAGTAGGTGCACACACACGCAGAACAAAGGCCTCTTCTGGTTGCCCAATGCTTAGAAAACATAAACTACAACATGAATTCAGGAATGAGGTATCTGAACGAGGACCCTTGGATATTGAAGATCTTGCAAACCTTGGAAAAACATTGGGAACCTGTCCGTACTATGGCTCTAGAAGCATGGTTGTGAGAGCTGATCTTGTTGTTCTTCCATATCAATCTCTTTTGTCGAAATCATCTCGTGAAGCTCTTGGTCTGAATTTAAAATCCAATATTGTTATAATAGATGAGGCACATAATTTAGCTGATTCACTCATCAGCATGTATGACTCAAAAATTACTTTATCACAGCTGGAGAATGTGCATTGCCATGTAGAATGGTACTTTGTGAGATTCCGGAGTCTTTTGGGACCAGCCAACCGGAGATATATTCAAACTCTGATGGTTCTGACTCAAGCTTTCCTTCGAGTACTACTCAATGAGAAGAATGGAAATCCGATGGATTCTTACCATGACATAGAACATGCTTCTGAAGAAAGTAGAACATCTGATTTTACTATGGCCATCAATGATTTTATCTTTGAACTAAATATAGACAATATCAACTTGATCAAATTGTTAAAGTATATAAAGGAAAGTAATATCATGCACAAGGTTAATAGTTATGGAGAAAAGGTGGCTAATTTGGAGAATACATCAGCACGCAATGAAATTCGGGAACATGGGGAGGAGGGGGGATGTCTGTCTGCTTTCCAGGCATTAGCGGATATATTACTGTCACTGACAAACAATGATAGCGATGGAAGGATAATAGTTTCGAGGTCTAGTTCATCATCAAGCTTTAGGAAACAAGGGGGATATATCAAGTTTGTTATGCTCAGTGGCGAGAAGATTTTCTCTGAGATTGTAGATCAAGCACATGCTGTTCTATTAGTAGGGGGAACTCTTCAACCTATAGAAGAGACAAGGGAGCGATTATTTCCGTGGTTACCACCGAATCAGTTGCATTTCTTTTCATGCGGCCACATTGTCCCTCCAGATAGCATTATGCCAATTGCGATTTCTCGTGGTCCTTCTGGCCGCTCCTTTGATTTTAGCTACAGCTCTAGAAGCTCACTAGACATGATGCGAGAACTAGGCCTTTTGCTATGTAACTTGGTGACTGTGGTTCCTGAAGGAATCGTAGTCTTCTTCCCTTCTTTCGATTATGAAGGTAAAGTGTATGAACTCTGGGGATCTTCTGGCATCATTGAGAGGATTACTAGGAGGAAGCGTATCTTTAGAGAGCCTAGGAATAATATGGAAGTTGAATCTGTTCTAAAGGAATATAAAGATGCCATTTGTGCATTATCAAGTGTGAGTACAGAAGCAAACCAAGCATCTCAAAGTGGTGCAGTGCTCCTTGCTGTTGTTGGTGGGAAGATATCTGAAGGGATCAACTTAAGTGATGGAATGGGTCGGTGTGTCATCATGGTTGGACTGCCATATGCTAGTCCATCTGATATCGAGTTATTGGAAAGGATAAAGCACATAGAAGGTTTTCGAAATTCGAAGTCCATTGAAAATACCCCATTTGGTGCTAGTTGTGATGTATATAGTGGAGATGCACAAGGTAGAGCAATTCGTCATATTAATGACTATGCAGCAATTTTGCTTGTTGATACTAGATATGCATCTGATTCCTCCAAAAGGAGCTTATCCCACCCAGTCAACAAGCTACCACAGTGGATAAAAGATCGTCTTGTTTCTTCCACTAATAACTATGGTGAAGTGCACAGATGTACCGGGTTGAATTTGGTGCACCGTGCATTAAGGCAATACAATGGTAGAGATTTGAACAATGAAAAGTGTGGCAATGTGGCATCCGTCATGATTCAAGTTTATTCCTTTTGA 2124 0.4054 MEVKEEEEEVKFSAFPFKPYSIQMEFMKALYHSLNQGGVSMLESPTDVLSLGNSTRINERCLELQKKKKNEATRVKNIRVGAHTRRTKASSGCPMLRKHKLQHEFRNEVSERGPLDIEDLANLGKTLGTCPYYGSRSMVVRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLISMYDSKITLSQLENVHCHVEWYFVRFRSLLGPANRRYIQTLMVLTQAFLRVLLNEKNGNPMDSYHDIEHASEESRTSDFTMAINDFIFELNIDNINLIKLLKYIKESNIMHKVNSYGEKVANLENTSARNEIREHGEEGGCLSAFQALADILLSLTNNDSDGRIIVSRSSSSSSFRKQGGYIKFVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSIMPIAISRGPSGRSFDFSYSSRSSLDMMRELGLLLCNLVTVVPEGIVVFFPSFDYEGKVYELWGSSGIIERITRRKRIFREPRNNMEVESVLKEYKDAICALSSVSTEANQASQSGAVLLAVVGGKISEGINLSDGMGRCVIMVGLPYASPSDIELLERIKHIEGFRNSKSIENTPFGASCDVYSGDAQGRAIRHINDYAAILLVDTRYASDSSKRSLSHPVNKLPQWIKDRLVSSTNNYGEVHRCTGLNLVHRALRQYNGRDLNNEKCGNVASVMIQVYSF 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00221 707 TIGRFAM rad3: DNA repair helicase (rad3) 53 665 IPR013020 GO:0003678
Adu09g00221 707 SMART deadxpd 11 218 IPR006554 GO:0003678|GO:0016818
Adu09g00221 707 Pfam DEAD_2 47 195 IPR010614 GO:0003677|GO:0003678|GO:0005524
Adu09g00221 707 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 1 234 IPR014013 GO:0005524
Adu09g00221 707 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 12 47 IPR045028 -
Adu09g00221 707 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 48 668 IPR045028 -
Adu09g00221 707 Pfam Helicase C-terminal domain 460 647 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Adu09g00221 707 Gene3D - 438 650 IPR027417 -
Adu09g00221 707 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 12 47 IPR028331 -
Adu09g00221 707 Gene3D - 51 233 IPR027417 -
Adu09g00221 707 SMART Cxpdneu3 478 636 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Adu09g00221 707 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 48 668 IPR028331 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00221 Adu-Chr9 2438562 2442987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00221 K11273 - gmx:106794132 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00221 09 2438562 2442987 Adu09g00221 09 2438562 2442987 ECH