Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00195 ATGCCATCAGCAACTACTACTTCAGATTCTGGGGGACAAAAAATGTTTCGCTGGTTCTTGAAACCAAGATTCTACTCAAAATGCTTGACGTACGTGAAGTTCTTAAGGACGAGGCTAGAGAGTGTACAAAAGAAGAGGAATGCGGTTCATAAGATTATGAAGAGTGACATTGCAGAGCTTCTCAGGAATGGACATTATTATGATGCTTATAAAAGGGTTGAAGGGCTTGTATTGGAGCAAAATATGTTATTTTGTTATGAACTTGTTGCACAGTTCATTGGATGCATATCAGATCATGTTCAAGACTTAACTAAGCAGAGTATTTGCCCTGATGAATGCAAAGAAGCTGTTCCATCATTGATATATGCTGCAGCAAGAATTTCTGCTCTTCCAGAATTGCGTGACCTCAGAACATTGTTTACAGATAAATTTGGAAATTCTCTTGAACCTTATACAAGTAAAGAGTTAATTGAGAAGTTGAAGAAAGATCCTCCTTCTAGAGAAATGAAGATTCAGTTATTGCATGAAATAGCACAAGAGTTCTCTATAGAGTGGGATAGCAAAGCTTTGGAGCAAAGGCTTTCGAGACAGCCATCATTGTATGAAGAGAGGCCTAAACCTGAAAAAACAGAGAAGCAAGTTGGTGTGGAAAAAGAAAACAAAAAAGAAACAGACTATAATGCATCATCACAAGAAGGAATCAAAGAATTCAATGATGAACAATGGAGGCAGCAAATCAGCAGTGACGACGACGACGATTCTAGCACCGATATGTCATCGGTTCACGGCCGAAAGCCGAGTTCTAGCTCCCTCGGAAGCATATCCGAGGATGACACAGAAATCATCAGTAACAAGAAACCTTATTGGCTTGTTCCTCCTCCTTACCTCAAACAAAAAACTAACAGAGGCGAAATCAATTCAAATTCAAAGAAGAAAACAAGGACAGATTCGGAACCAAACCATGAGGATCAAGCTCCAAGATCATCATCAAGGAGCAGAAACATGATGAAATCAAGAGCAACAGAGGATAACATTATTGGTTCTGATTCTTCCAAGAACAGAAGATCATATGTTAGAGGAACATCTCTTCCTCCTAGAGCAACAAACTCATCATCAGTTGAAGAAACATCAAGAGGGCATGGAAGATCAATTTCAATGGATTCTGAAGTGAAGAGTATTGTGCATCCTAATCTACCTGATTATGATGATTTGGCAGCACGTCTTAGAGCTCTCAGAAGAACATAA 1245 0.3912 MPSATTTSDSGGQKMFRWFLKPRFYSKCLTYVKFLRTRLESVQKKRNAVHKIMKSDIAELLRNGHYYDAYKRVEGLVLEQNMLFCYELVAQFIGCISDHVQDLTKQSICPDECKEAVPSLIYAAARISALPELRDLRTLFTDKFGNSLEPYTSKELIEKLKKDPPSREMKIQLLHEIAQEFSIEWDSKALEQRLSRQPSLYEERPKPEKTEKQVGVEKENKKETDYNASSQEGIKEFNDEQWRQQISSDDDDDSSTDMSSVHGRKPSSSSLGSISEDDTEIISNKKPYWLVPPPYLKQKTNRGEINSNSKKKTRTDSEPNHEDQAPRSSSRSRNMMKSRATEDNIIGSDSSKNRRSYVRGTSLPPRATNSSSVEETSRGHGRSISMDSEVKSIVHPNLPDYDDLAARLRALRRT 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00195 414 MobiDBLite consensus disorder prediction 236 259 - -
Adu09g00195 414 MobiDBLite consensus disorder prediction 260 278 - -
Adu09g00195 414 Pfam Regulator of Vps4 activity in the MVB pathway 31 183 IPR005061 GO:0015031
Adu09g00195 414 Gene3D - 20 191 IPR042277 -
Adu09g00195 414 MobiDBLite consensus disorder prediction 196 397 - -
Adu09g00195 414 MobiDBLite consensus disorder prediction 304 328 - -
Adu09g00195 414 PANTHER IST1 FAMILY MEMBER 22 413 IPR005061 GO:0015031
Adu09g00195 414 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 22 413 - -
Adu09g00195 414 MobiDBLite consensus disorder prediction 196 229 - -
Adu09g00195 414 MobiDBLite consensus disorder prediction 329 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00195 Adu-Chr9 2065992 2069201 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00195 - - ahf:112709856 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00195 09 2065992 2069201 Adu09g00195 09 2065992 2069201 ECH