Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00166 ATGGAACTTATTTCCGGTTTGCCCGAAGACTTGGCCCGAGACTGTTTGATTCGGGTCTCATACCAACAATTCCCAACGGTGGCATCGGTTTGCAAAAACTGGAAAGAGGAGGTTGAGTCGCCGGAGTTTCGCCGTCAACGCCGGCGCACCGGCATCTCACAGAAGCTCATCGTGATGGTTCAAGCACGATGTGACCCGGATAATGAACCCGGATCCGGTTCATCAAAGCGATTATATAACCCAGTTTACCGTCTCAGCGTGTTCGAACCGGTAACCGGTAACTGGAGCGAGTTGCCTCCTCCACCGGAGTTTGAATCCGGGCTACCCATGTTTTGTCGGGTCGCTAGCGTTGGGTCGGAGCTTATCCTATTGGGCGGGTTAGACCCAAATACATGGAAGGCTTCTGATTCCGTTTTGATTTATAACTTCATTACCGCGAAGTGGCGCCGGGGGACTCACATGCCTGGTGGGTCCCGCATGCTCTTTGCATGCGTGTCAGACTCGCGGCGAATGGTATTCGTCGCCGGTGGACACGACGACGAGAAAAATGCACTGCGATCCGCGCTGGCGTATGACGTGGCAGAGGATAAGTGGATATCCCTGCCCGACATGGCGGCGGAGCGCGACGAGTGCACGGCCTTGTTCCGCCACGGGCGACTGGCTGTCATCGGTGGTTATCGGACGGAAACGCAGGGTGTGTTTGAAAGGAGCGCGGAGGTTTTTGACGTTGCCACGTGGCAGTGGGGTCCAGTGATGGAGGAGTTTTTGGATTGCGCCACGTGTCCGAGAAACTCGACGGACGGTGGTGATGTGGACGGGAGAGTGATCATGTGTTGCGGCGAGGAGATAAAATCGAGGCAGGGTGGCACGTGGCAGAAGATGGGGAAGGTGCCGGTGGAGATACGGAACGTGGCGTACGTTGGAGCGTTGGATGGATGTGCCGTGGTGATTGGATCCAACGGTCACGGAGAGGCGCATGAAAGTTTCGTGTTTGATTTGAAGAGTTGTAATTGGAGAAAGGTTGAAACCCCAGAAAAATTCAGGGGGCATGTCCAAACAGGTTGTGTTTTGGAGATTTAA 1080 0.5472 MELISGLPEDLARDCLIRVSYQQFPTVASVCKNWKEEVESPEFRRQRRRTGISQKLIVMVQARCDPDNEPGSGSSKRLYNPVYRLSVFEPVTGNWSELPPPPEFESGLPMFCRVASVGSELILLGGLDPNTWKASDSVLIYNFITAKWRRGTHMPGGSRMLFACVSDSRRMVFVAGGHDDEKNALRSALAYDVAEDKWISLPDMAAERDECTALFRHGRLAVIGGYRTETQGVFERSAEVFDVATWQWGPVMEEFLDCATCPRNSTDGGDVDGRVIMCCGEEIKSRQGGTWQKMGKVPVEIRNVAYVGALDGCAVVIGSNGHGEAHESFVFDLKSCNWRKVETPEKFRGHVQTGCVLEI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00166 359 SMART kelc_smart 120 169 IPR006652 GO:0005515
Adu09g00166 359 SMART kelc_smart 171 218 IPR006652 GO:0005515
Adu09g00166 359 Pfam Kelch motif 172 204 IPR006652 GO:0005515
Adu09g00166 359 Pfam Kelch motif 112 155 IPR006652 GO:0005515
Adu09g00166 359 PANTHER OS02G0208700 PROTEIN 1 359 IPR044595 GO:0080037|GO:2000762
Adu09g00166 359 Pfam F-box domain 4 43 IPR001810 GO:0005515
Adu09g00166 359 SUPERFAMILY Kelch motif 80 343 IPR015915 GO:0005515
Adu09g00166 359 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 1 359 - -
Adu09g00166 359 SUPERFAMILY F-box domain 3 49 IPR036047 GO:0005515
Adu09g00166 359 Gene3D - 44 353 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00166 Adu-Chr9 1836895 1838405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu09g00166 7 198 Miscellaneous Gene Families AT4G33900 26.066 3.21e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00166 - - gmx:100796602 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00166 09 1836895 1838405 Adu09g00166 09 1836895 1838405 ECH
Adu07g02486 07 79059287 79061079 Adu09g00166 09 1836895 1838405 PCT