Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00134 ATGTTATCCGGGTCGGGTTCATCGGTGATGTGGTTTCGGAAAGGTCTTCGGATCCACGACAACCCGGCGCTACAACTTGCTTCACAAGGCGCGTCTCATCTCTACCCGCTATTCGTGGTGGACCCGCATTATATGGAGCCTGACCCGACCTCATTCTCGCCCGGTTCGTCGCGCGCGGGTCTTAACCGCACCAAGTTCTTGCTGGAGAGTCTTGTGGACTTGGATCTCAGCCTCAAGAACCTTGGCTCGCGTTTATTGGTTCTTAAGGGTGACCCTGCCGAAGTTCTCATTCGCTGCTTGAAGGAGTGGAACGTCAGAAAGCTATGTTTTGAGTATGACACTGAGCCATATTATCAGGCTCTAGATACTAAAGTAAAGAACTTTGCACTTGGAGCTGGGATTGAGGTTTTCTCTCCTGTGAGTCACACACTCTTCAATCCCACAGAAATTATAGAGAGGAACGGAGGGAAGCCACCACTTACTTATCAATCATTCACCAAAATTGCGGGGCAACCACCGCCACCTCTCACAATCACACACTCTTCGCTTCCTCCCATTGGTATTCTTGGGAGCTGTGATATTTCTGAGGTTCCTACAATCGAAGACCTTGGATATGGAGATGCTAAACAGGATGAATTCTCTCCTTTCAAAGGCGGTGAATCGGAAGCGTTGAAGAGGCTGGCAGAATGCATGAAAGACAAGGCATGGGTCGCAAAGTTTGAGAAACCAAAGGGTAATCCATCTGCATTTCTTAAGCCCGCAACAACTGTTTTATCACCTTACTTAAAATTTGGTTGTCTTTCCTCCAGATATTTCTACCGGCAGATTCAAGATGTCTATGAAACCATGCCGAAGCATACATCACCACCTGTGTCTCTTCTAGGACAGTTATTGTGGAGAGACTTCTTTTACACAGTAGCTTTTGGAACTCCAAACTTTGATAGGATGAAAGACAACAAGATATGCAAACAGATTCCTTGGAAGGATGATGATAAACTGTTAGAGGCTTGGAGGAATGGTCGCACAGGATTTCCATGGATTGATGCTATCATGGTCCAGCTACATCAATGGGGTTGGATGCATCATCTGGCACGTCATTGCGTTGCGTGTTTTCTAACTCGAGGTGATCTGTTTGTTCACTGGGAGAGAGGACGTGATGTCTTTGAGAGGCTTCTGATCGATGCAGATTGGGCTATTAATAATGGAAACTGGTTGTGGCTCTCATGTTCTTCCTTCTTTTATCAGTATAATCGTATTTACTCCCCGACATCCTTTGGTAAGAAGTATGACCCTAATGGTGACTACATTAGACACTTTCTCCCTGTCTTAAAAGATATGCCGAGGCAGTACATATATGAACCATGGAGTGCTCCTCTAAGCATTCAGACCAAAGCAAATTGCATTATTGGCAAAGACTACCCAAAGCCAGTTGTTTTGCATGATTCTGCGAGTAAAGAGTGCAAAAGGAAAATGGGCGAGGCGTATGCACTGAGCAAAGAACTGGATGGTGTTGTTAATGAAGATGATCTGAAAAACTTGAGAAGGAAACTAGACGAGGGTAAAGAACAAGAGACTAAAGCCAAGAGACCTAGAAACACAAGAGTATGCATGTTTAGAATGTTGTTTTGCCTTTTAATCACATCCTTGTGA 1650 0.4497 MLSGSGSSVMWFRKGLRIHDNPALQLASQGASHLYPLFVVDPHYMEPDPTSFSPGSSRAGLNRTKFLLESLVDLDLSLKNLGSRLLVLKGDPAEVLIRCLKEWNVRKLCFEYDTEPYYQALDTKVKNFALGAGIEVFSPVSHTLFNPTEIIERNGGKPPLTYQSFTKIAGQPPPPLTITHSSLPPIGILGSCDISEVPTIEDLGYGDAKQDEFSPFKGGESEALKRLAECMKDKAWVAKFEKPKGNPSAFLKPATTVLSPYLKFGCLSSRYFYRQIQDVYETMPKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDRMKDNKICKQIPWKDDDKLLEAWRNGRTGFPWIDAIMVQLHQWGWMHHLARHCVACFLTRGDLFVHWERGRDVFERLLIDADWAINNGNWLWLSCSSFFYQYNRIYSPTSFGKKYDPNGDYIRHFLPVLKDMPRQYIYEPWSAPLSIQTKANCIIGKDYPKPVVLHDSASKECKRKMGEAYALSKELDGVVNEDDLKNLRRKLDEGKEQETKAKRPRNTRVCMFRMLFCLLITSL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00134 549 CDD USP_Like 23 108 - -
Adu09g00134 549 Gene3D - 142 183 - -
Adu09g00134 549 Gene3D - 194 310 - -
Adu09g00134 549 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 207 495 IPR036134 -
Adu09g00134 549 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 6 144 IPR006050 -
Adu09g00134 549 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 184 IPR036155 -
Adu09g00134 549 Pfam DNA photolyase 8 169 IPR006050 -
Adu09g00134 549 Gene3D HUPs 5 141 IPR014729 -
Adu09g00134 549 PANTHER (6-4)-PHOTOLYASE, ISOFORM A 8 499 - -
Adu09g00134 549 Pfam FAD binding domain of DNA photolyase 295 491 IPR005101 -
Adu09g00134 549 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 311 535 - -
Adu09g00134 549 PANTHER CRYPTOCHROME 8 499 IPR002081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00134 Adu-Chr9 1311213 1315875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00134 K02295 - gmx:100780347 966.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu09g00134 09 1311213 1315875 Adu09g00134 09 1311213 1315875 ECH