Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00099 ATGCAAATTGTAAGCACCCTTAGAACCCTTCCCAAAACCCCTCGCTTTGATCACTTTGCTCCTTCCGCCATGGCCCTTCTTCTTCTTCTTCAACTCAGGACCAAACCCAACAACAACCCTTTCACAAACCCGACTTTGTTCTTTTTATTCTCCAAATATTTTTCTTCTTCTTCTTCTTCTTCTCTCAGGGACCTTAAACACACTCTCAAACACCAACAACCACAATCACAATCACAATCACAATATCCTTCAACACCCTCAGAGCAATCCTCATTCACCAACACTCATTATCATCAGCAGCAACAGCAAAAGCAACATCAGCAACAACAGAAGAACTCTCTCCACGATATCCGTCAAACCCTCTCCGAGTTTCGCCGCCGCACCGCCGTCGAATCCCCGCCGGCCGAACCGCTTTCATTCAGTGATATCTACGACCGAACCATGTGCCGGAAAACGCCCTTTCCGGACGTGGAATCCTCCGGTACGGCGCACGGAGGAGGGAGGAGACCTTTCAACCTCGGCGCCGTTCGCGATGGCTTGCGGAAGCCAGGAGAAGCTCGCGCCAGAGACCGGAGGAGAGCTGATTCGATGTCGTTGGAGGCGTACAGGGAGGTGCTGAGATCGAGGCCGTTAGATTCCTCCGCCACCGCAGCAGCTGGAGCATCCTCGCCGGAGAATGTGGTTGGCACTGCGAGCTCGTTGCCGGATTCTGTGTTGAAGCAGAAGAGACGCAAAGAAGAATCCGAGTTTATGAAGGTTTATAGCTTTGGCGAATTGGGGGAGAAATTGAAGAAGTTGAGACCTGAGGGAATGAGAAAAGAGTGGTTCTCTATTGAAGAATTGAACGAGAGGTTGAAGAGGATGAGAGAGAAGGAGGTGGAGGAAGCTGAGTCCAATGTCACAGGAGAGGTACTATTCAAGGACATGAGAGAGTGCCTGCTATCTGAAGATGAAAAGTCTAGGAAGAGTTCACTGCAGAAATCTGATATCTTAAGCCAGTTCATTGGGACTCCAGCCTACTATTCGGGTCCCCCTAAAGAGCAGCTTGTTGAAAAATACTTCCATCCAGATAATATGTCCTCAGAAGAAAAGTTGAAAATTGAACTTGCAAAGGTTAGAGATGAGTTCAAAATGTCAGAGTCAGACTGTGGATCTGCTCGAGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCAGCTGTTCTACACAAGAAGGATGTGCATTCTCGTAAAGGCTTGATAGCAATGGTCTACGTGATAATCCAGATCATGGTCGCAAAACATAGGCCAGAGGTAGTTGATCAAGTCATGCAATCAGTTCATATGGTCATTCTTCTGGTAGACCAGGGAGAAATACTTCTATGA 1371 0.4756 MQIVSTLRTLPKTPRFDHFAPSAMALLLLLQLRTKPNNNPFTNPTLFFLFSKYFSSSSSSSLRDLKHTLKHQQPQSQSQSQYPSTPSEQSSFTNTHYHQQQQQKQHQQQQKNSLHDIRQTLSEFRRRTAVESPPAEPLSFSDIYDRTMCRKTPFPDVESSGTAHGGGRRPFNLGAVRDGLRKPGEARARDRRRADSMSLEAYREVLRSRPLDSSATAAAGASSPENVVGTASSLPDSVLKQKRRKEESEFMKVYSFGELGEKLKKLRPEGMRKEWFSIEELNERLKRMREKEVEEAESNVTGEVLFKDMRECLLSEDEKSRKSSLQKSDILSQFIGTPAYYSGPPKEQLVEKYFHPDNMSSEEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSAVLHKKDVHSRKGLIAMVYVIIQIMVAKHRPEVVDQVMQSVHMVILLVDQGEILL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00099 456 Coils Coil 278 298 - -
Adu09g00099 456 MobiDBLite consensus disorder prediction 211 242 - -
Adu09g00099 456 SUPERFAMILY S15/NS1 RNA-binding domain 369 419 IPR009068 -
Adu09g00099 456 MobiDBLite consensus disorder prediction 215 237 - -
Adu09g00099 456 Pfam Ribosomal protein S15 371 419 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu09g00099 456 MobiDBLite consensus disorder prediction 155 178 - -
Adu09g00099 456 PANTHER S15/NS1, RNA-BINDING PROTEIN 33 419 - -
Adu09g00099 456 PANTHER S15/NS1, RNA-BINDING PROTEIN 33 419 - -
Adu09g00099 456 SMART Ribosomal_S15_2 369 445 IPR000589 GO:0003735|GO:0005840|GO:0006412
Adu09g00099 456 MobiDBLite consensus disorder prediction 65 114 - -
Adu09g00099 456 MobiDBLite consensus disorder prediction 71 114 - -
Adu09g00099 456 Gene3D - 364 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00099 Adu-Chr9 838598 841853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00099 - - ahf:112709767 718.768