Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00093 ATGGCAGAGATCAAGAACAAGATCAAGATGAAGGCATCAGTGAGTTTTCCTGATGAATGCTGGGAATCAATCTTCAGATTCCTAGGCCACGGCCGAGACTTGGAATCGGTGTCCATGGTCTGCAAGCGGTTCCTCACAATTTCAAGCCAGCTTCAAGATTCCCTCACAATATTTGATGCAACAACAATGCTCATTCCAAAGCTGTTCTTGAGATTCTCAAGGCTCAAAGTCTTAGACCTCAGTTACTTCAATGGGAACCTCGAAGGCCTGCTTTGTCAGGTTTCACAATCCACCTTGGACCTTGATACCCTTAACCTTTCCAATCAGAGGACACTTCCCATTGATTTGTTCCGGGACATCGGCTCGAAGATGAAGAACTTAAGGGTGTTGATTTGTTCAAACATTGGCTCTCTTTGGGATAGCCATTTGATGATCATGGCCTATTGTTTCCCATTGCTTCAAGAGCTTGACATCAGCTTCCCATTGATTTCAGAAGCAACAGATTTTGGGATCTCAAAGTTGTCTTTGTTGCTTGAGCGCCTTCGCAAGATTAACTTCTCTGGAAACTACTTAGTCACTGATCAATCACTGGTAGCTCTGTGTCAGAACTGTATGACAATTGAAGACATTTCATTCTTCAATTGTTTTAAGATAACTCAAGGAGGCATTGCTAATGCTATCAACTTCAGACCAACCTTGGCTTCCATAGCATTCAACATTAAGAAAAGAAGAATTCATGGACGTGGCTTGGCACCTATGCCAATTAACTTGGATTTGATTGATTCACTCAAGAGTTTGAAAAGCTTAACTTGTATTGATTTGTCGAATTCTTTTATCTCGGATGAGTTGCTCTGTTCTGTTGCAGAATGTTGTCATTCCATAAAGAAACTCATCCTCCAAGACTGCTGCAATTTCACATTTTCAGGAATATATTCTGTGGTATCAAATTGTCCATTAATACAATGCTTGGATCTTAGAAAAACCGACTTCCTAACCGATCATTGTATTGGCAAGCTATCAATGTTTCTTCTCAATTTAACCTCTATAAACCTCAGTGGTTGTGATCAGCTTACCAATTCAACATTTTACACACTGACAAGAGGTTGTCCTAAACTTGTTGAGATTAAAATGGACAGAACATATCTTGGAGAAGTAGGGGAAGATTCAGATTCTTCTCTTGTTCCGGTTCAGAACACTCAAGTGAAGAGTCTCTATCTGGGTCAAAATATTTTACTTGGTGATCAAAGTTTGATGAAAATGGCTTCTATTTGCCCCAATGTAGAGCTTCTCGACTTAAACTCTTGCGGCAGCATATCAGGAGAATGTGTCGTGGACGTTCTCAGGAAATGCCGAGAGATAAGGCACTTAGGCTTAGCCAATACAGGGGTGAAGCTGTTGAAGATGGACTTTAAAGTTTTGCAACTGAAGGTATTGAACTTGTCAGGATCAAGAATCAATGATGAAGCACTCTCCATAATCTCAAAATGTTGCTGTGGACTAGTAGTTCTGGATATTCAAGGTTGCAACAATGTTACCACAAAAGGGGTGAAGGAAGTGGTAGAAAGCTGCATGGAGTTGAGAGAGCTGAATTTGAAGAACTGTGATTTTGTAAATGATAATTTTGTTGCTTCCTTAGAACTTATAAGGCCATCATTGAGGAGAATAATCACAAACTCTTATGTTGGTGTTTGA 1692 0.4013 MAEIKNKIKMKASVSFPDECWESIFRFLGHGRDLESVSMVCKRFLTISSQLQDSLTIFDATTMLIPKLFLRFSRLKVLDLSYFNGNLEGLLCQVSQSTLDLDTLNLSNQRTLPIDLFRDIGSKMKNLRVLICSNIGSLWDSHLMIMAYCFPLLQELDISFPLISEATDFGISKLSLLLERLRKINFSGNYLVTDQSLVALCQNCMTIEDISFFNCFKITQGGIANAINFRPTLASIAFNIKKRRIHGRGLAPMPINLDLIDSLKSLKSLTCIDLSNSFISDELLCSVAECCHSIKKLILQDCCNFTFSGIYSVVSNCPLIQCLDLRKTDFLTDHCIGKLSMFLLNLTSINLSGCDQLTNSTFYTLTRGCPKLVEIKMDRTYLGEVGEDSDSSLVPVQNTQVKSLYLGQNILLGDQSLMKMASICPNVELLDLNSCGSISGECVVDVLRKCREIRHLGLANTGVKLLKMDFKVLQLKVLNLSGSRINDEALSIISKCCCGLVVLDIQGCNNVTTKGVKEVVESCMELRELNLKNCDFVNDNFVASLELIRPSLRRIITNSYVGV 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00093 563 SUPERFAMILY F-box domain 15 49 IPR036047 GO:0005515
Adu09g00093 563 SUPERFAMILY RNI-like 64 219 - -
Adu09g00093 563 PANTHER NODULIN-LIKE PROTEIN 325 549 - -
Adu09g00093 563 PANTHER NODULIN-LIKE PROTEIN 10 239 - -
Adu09g00093 563 PANTHER NODULIN-LIKE PROTEIN 229 324 - -
Adu09g00093 563 PANTHER UNCHARACTERIZED 325 549 - -
Adu09g00093 563 PANTHER UNCHARACTERIZED 10 239 - -
Adu09g00093 563 PANTHER UNCHARACTERIZED 229 324 - -
Adu09g00093 563 SMART LRR_CC_2 523 548 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 266 290 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 291 316 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 497 522 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 472 496 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 343 368 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 424 449 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 317 339 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 398 423 IPR006553 -
Adu09g00093 563 SMART LRR_CC_2 178 203 IPR006553 -
Adu09g00093 563 SUPERFAMILY RNI-like 258 546 - -
Adu09g00093 563 Gene3D Ribonuclease Inhibitor 342 466 IPR032675 -
Adu09g00093 563 Gene3D Ribonuclease Inhibitor 6 243 IPR032675 -
Adu09g00093 563 Gene3D Ribonuclease Inhibitor 254 341 IPR032675 -
Adu09g00093 563 Gene3D Ribonuclease Inhibitor 467 560 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00093 Adu-Chr9 808394 810104 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00093 K10268 - gmx:100811565 703.36