Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu09g00092 ATGTTTCCATCATCAAGAATTTGCAGACACCAAGAGCTACATTTACCAGATGAGTGTTGGGAATTAGTTTTCAAACACCTTAGCGACCCTCTCGATCACGAATCACTCTCCCTCGTCTCGCGCCACTTCCTTTCCCTCACCAACGGCACCCACACCGACCTCGCCGTATCCGACCGTGTCCTCCCACTCATTCCCGTCCTCCTCCGCCGTTTTCCCAACCTCACGACCATCAAAATCACGCGCTACTTCACCGGTGACATCAACGCGCTCCTCTCCCAAATCGCTTCCTTCAACCTCCCCTCACTCCATTCTCTCGACCTGTCTCACCAACCCACCTTCCCCTCACATGGGTTGCGACAATTCTCCGAAAAGTTTTCAGCTTTGAAGTCACTCAACTGTTCCCACGCCCGTCATGATTTGGATTTAGTTGCCGAGTGCTTCCCAAACCTGGAAGAAATCGATGTGAGTTTCCGTAAATATAAAATTGATATTGTTTCGGATTGGGAAAAGGCATTGACTTCAGGGCTTAAGAAGCTTAGAAAGGTGACTATTTCGGGTAACTTCACCCATGGAGACTCTTACCTTCTTGCCTTGTGTCACACTTGTGTGTTTCTAGAAGAGTTAGTTGTTATTCAAACCGGCCCTGTTTCTATGATAGGCATTGCCAATGCGATTCGCAAGAGACCCGAATTGAGGTCTTTATCAGTTAATTGTTTGACTTATGGGTTTTTTAGTGAGGACCTTAGAAAGGGGAATGTGACTTTGGAGTTCATTGATGCATTGGTGAGTTTGAAGGGATTGAATTGTCTTGATTTGTATTATTCAAGTATATCTGATGAGGCCTTGTCTACTATTGCGGAAGAAAGCCTTCCGTTGAGGAAACTCTCTCTAAGATGTTGTAAGGGATATGGATACGGTGGGATCTCTTACTTGTTGAGAAAGTGTAACAATTTACAGTATTTGGATCTTCAAATGACGCAGTTTCTGAATGATCAGTGTGTGGTTGAGTTGTCTTTGCTTCTTGGTAACTTGAAGTTTGTGAAACTTAGTGATAATGCAAAGCTTACTGATTTAAGCTTGTTTGCCATTATGCGCAACTGTCCTTTGATAACCGATATCAGGATGGAGAGTACAGGCATTGGAAAGCAGAAGCTGCAGGAAGATTGTTTGGTTGTGAATTCTCATGTAAAGTTTCTCTATTTGGCTAGCAATACCTGGTTGGATGATGAAACTGTCACTATGCTTGCTGCGGTTTGCCCCAACTTGGAGATGATAGATTTGAGCAAATGCGGAAGGGTTTCAAAAGGTGCTATTGATGTTTTGTGGAGCTGTCGTAAGATTCGGCGCATGGACTTAGCTCTATTAGGACATGAGCTGTTTCAATTTCGGTTTCGAGTTTGCTTCGATGTTCCTACATTGTTTGTGTTGAATTTGTCCCAATTGAGTATTAGCAACGAGGAACTCTACCTTATTTCAAAGAGTTGTTGCAAGTTAAAAGAACTTGATTTAGAAAGTTGTCACAAAATCACAACCAGGGGAGTAAAGCAGATGGTGAAAAATTGCAAGCAACTAAGAACGATAAGTTTAGCAGCTTGTGAAAAAGTATCTGCTAATGTCGTTGCTTGGATGGTATCTGCAAGGCCATCGTTGAGAAAAATAAGACCTCCGCCTCGATTCTCTGCTACCGAGAGCCAGAGGGATCTCTTCCGGCGTCATGGATGCTTTGTTGGCAAGTGGTCTAATTAA 1746 0.4353 MFPSSRICRHQELHLPDECWELVFKHLSDPLDHESLSLVSRHFLSLTNGTHTDLAVSDRVLPLIPVLLRRFPNLTTIKITRYFTGDINALLSQIASFNLPSLHSLDLSHQPTFPSHGLRQFSEKFSALKSLNCSHARHDLDLVAECFPNLEEIDVSFRKYKIDIVSDWEKALTSGLKKLRKVTISGNFTHGDSYLLALCHTCVFLEELVVIQTGPVSMIGIANAIRKRPELRSLSVNCLTYGFFSEDLRKGNVTLEFIDALVSLKGLNCLDLYYSSISDEALSTIAEESLPLRKLSLRCCKGYGYGGISYLLRKCNNLQYLDLQMTQFLNDQCVVELSLLLGNLKFVKLSDNAKLTDLSLFAIMRNCPLITDIRMESTGIGKQKLQEDCLVVNSHVKFLYLASNTWLDDETVTMLAAVCPNLEMIDLSKCGRVSKGAIDVLWSCRKIRRMDLALLGHELFQFRFRVCFDVPTLFVLNLSQLSISNEELYLISKSCCKLKELDLESCHKITTRGVKQMVKNCKQLRTISLAACEKVSANVVAWMVSARPSLRKIRPPPRFSATESQRDLFRRHGCFVGKWSN 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu09g00092 581 Gene3D Ribonuclease Inhibitor 245 327 IPR032675 -
Adu09g00092 581 Gene3D Ribonuclease Inhibitor 52 237 IPR032675 -
Adu09g00092 581 Gene3D - 3 50 - -
Adu09g00092 581 Gene3D Ribonuclease Inhibitor 340 459 IPR032675 -
Adu09g00092 581 SUPERFAMILY RNI-like 57 300 - -
Adu09g00092 581 SUPERFAMILY F-box domain 13 49 IPR036047 GO:0005515
Adu09g00092 581 SUPERFAMILY RNI-like 214 550 - -
Adu09g00092 581 Pfam F-box domain 14 48 IPR001810 GO:0005515
Adu09g00092 581 PANTHER UNCHARACTERIZED 13 335 - -
Adu09g00092 581 PANTHER UNCHARACTERIZED 404 547 - -
Adu09g00092 581 Pfam Leucine Rich repeat 494 515 IPR001611 GO:0005515
Adu09g00092 581 PANTHER NODULIN-LIKE PROTEIN 13 335 - -
Adu09g00092 581 PANTHER NODULIN-LIKE PROTEIN 404 547 - -
Adu09g00092 581 Gene3D Ribonuclease Inhibitor 460 554 IPR032675 -
Adu09g00092 581 SMART LRR_CC_2 521 546 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 495 520 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 315 340 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 419 444 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 99 124 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 341 366 IPR006553 -
Adu09g00092 581 SMART LRR_CC_2 264 288 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu09g00092 Adu-Chr9 805648 807393 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu09g00092 K10268 - gmx:100819538 477.248