Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02904 ATGGATATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGACGCAAAGACAGAATATGATATGATTCAGAATTACAAAATTCTGCAGGAAGTGTTCAACAAGCTGAAAATTGATAAACATATTGAAGTTAACAGGCTAGTTAAAGGTCGACCTTTGGACAACTTAGAGTTTCTACAATGGCTGAAACGATACTGCGATTCTGTGAATGGCGGCATTATGAATGAGAATTATAATCCTGTGGAGCGTAGGTGTAAGGGTGGAAAGGGTGGAAATTCTAAAATTCTGAAGAGCTCAAAATACCTACAAACAAGTGCTATCTATAATGCTGGTTCAGGCGATATGCTGGGTCCCAATAGAATCTCTGTTCCCAAGCAATCAAAGTCAAGCAGAGGAGCAGGTGGGCCTAATTCTTCAGAAATTGAAGCATTGTCTAAGCAGGTTACTGATCTCAATCTCTCGATGGATCTCTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAAGCTGCCGAAGTGGAGAATGATCCTATGTCTGTAGCAATTAGGAAGATTTTGTATGCTACTGATACAAAGGAATCAGCACTAGATGAAGCCCAGGATTACCTTAACGAAAACTTCAATGCTGCTGACGATGAAGAGGAAGCTGAAGCTGCAGATGAAGAAGCTGCAGCTAAGGAAGAAACCAAAGCCTGA 726 0.4008 MDMTYPGVVPMHKVNFDAKTEYDMIQNYKILQEVFNKLKIDKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRCKGGKGGNSKILKSSKYLQTSAIYNAGSGDMLGPNRISVPKQSKSSRGAGGPNSSEIEALSKQVTDLNLSMDLLEKERDFYFAKLRDIEILCQAAEVENDPMSVAIRKILYATDTKESALDEAQDYLNENFNAADDEEEAEAADEEAAAKEETKA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02904 241 SUPERFAMILY EB1 dimerisation domain-like 142 201 IPR036133 GO:0008017
Adu08g02904 241 Pfam EB1-like C-terminal motif 160 198 IPR004953 GO:0008017
Adu08g02904 241 MobiDBLite consensus disorder prediction 124 143 - -
Adu08g02904 241 Gene3D - 137 205 - -
Adu08g02904 241 SUPERFAMILY Calponin-homology domain, CH-domain 1 86 IPR036872 -
Adu08g02904 241 Coils Coil 143 163 - -
Adu08g02904 241 MobiDBLite consensus disorder prediction 221 241 - -
Adu08g02904 241 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B 1 226 - -
Adu08g02904 241 Coils Coil 219 241 - -
Adu08g02904 241 Gene3D - 1 86 IPR036872 -
Adu08g02904 241 ProSiteProfiles Calponin homology (CH) domain profile. 1 69 IPR001715 GO:0005515
Adu08g02904 241 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 135 205 IPR004953 GO:0008017
Adu08g02904 241 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 226 IPR027328 GO:0008017
Adu08g02904 241 MobiDBLite consensus disorder prediction 120 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02904 Adu-Chr8 45525337 45529446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02904 K10436 - gmx:100809691 334.339