Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu08g02900 ATGCCTAGATCGGTGTTAGAGCTTATTCTGGTCAATAACACATCACTTTACTTCATGCCCAATTTCAAGAGGGAAAAACTTGTACTCCCTCATGACCCTTCCGGAGACTTGAAGCTTCAGTTGCAAAAACATGGAGAATCCGATTGTCGAGTTCCAAATTCAAGCCAGAAAACAAGTTCTTTAGGACAGCAGATGAGTGTGACATCTGACCCATTGAGAGTATTCATGTATGATTTGCCTCCAGAATTTCACTTTGGGTTATTAGGTTGGAAGGGAAGTGTAAATCAAACTTGGCCAGTGATTGACGACCTCAAATATATCCCCCACTATCCTGGTGGATTGAATCTACAGCACAGTATAGAATATTGGCTCACACTTGATCTTCTGTCATCAAACAATGCAAAACCTGGCCAACCTCACACCGCAATTAGAGTGCATGATTCAAGTCAGGCAGATGTAATTTTTGTGCCATTTTTCTCATCTTTGAGTTGCCTGCTAGACGCAAGGAAAAAATTGGGATCTGCTATGCTTGTGCTTGCCGATTTTGGAAGGTACCCTGTTGAATTAGCAAATGTGAAGAAAGATATAATAGCTCCCTATAGGCATCTAGTAAGCACCGTACCAAGAGCTAAATCAGCTTCATATAATGAACGCTCCACGCTGGTGTATTTTCAGGGTGCAATATACAGGAAAGATGGAGGAGCCATTCGCCAAGAGCTGTATTACCTTCTAAAAGATGAGAAAGATGTGCATTTTGCATTTGGGAGCATAGGAGGAAATGGAATCAATCAGGCAAGCCATGGAATGTCCCAATCAAAATTCTGCCTGAACATTGCTGGAGATACCCCGTCCTCCAATCGCCTCTTTGATGCAATAGTAAGCCACTGTGTTCCTGTGATCATTAGCGATGAAATCGAGCTACCCTTTGAAGATGTCTTGAACTACTCATATTTTTCCATTTTTGTCCGTGCCTCTGATGCNNNNNNNNNNNNNNNNNNNNNNNNNAATCTCCTCCATTCAATCAAGCGCGAGGAGTGGACCAAGATGTGGAAAATATTGAAGGATATCACTCATCACTTTGAGTATCAATATCCATCCAAGCCTGGGGATGCAGTAAATATGATTTGGCAGGATGTTGCACGTAAGATTTCTTCAGTGAAGTTCGATTTGCACAGGAAGAGCAGATACCGGAGATCTCAACTTCCGGTTAAGACAGACTGA 1221 0.4152 MPRSVLELILVNNTSLYFMPNFKREKLVLPHDPSGDLKLQLQKHGESDCRVPNSSQKTSSLGQQMSVTSDPLRVFMYDLPPEFHFGLLGWKGSVNQTWPVIDDLKYIPHYPGGLNLQHSIEYWLTLDLLSSNNAKPGQPHTAIRVHDSSQADVIFVPFFSSLSCLLDARKKLGSAMLVLADFGRYPVELANVKKDIIAPYRHLVSTVPRAKSASYNERSTLVYFQGAIYRKDGGAIRQELYYLLKDEKDVHFAFGSIGGNGINQASHGMSQSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLNYSYFSIFVRASDXXXXXXXXXNLLHSIKREEWTKMWKILKDITHHFEYQYPSKPGDAVNMIWQDVARKISSVKFDLHRKSRYRRSQLPVKTD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu08g02900 406 Pfam Exostosin family 169 327 IPR040911 -
Adu08g02900 406 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 163 IPR004263 GO:0006486|GO:0016757
Adu08g02900 406 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 165 393 IPR004263 GO:0006486|GO:0016757
Adu08g02900 406 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 2 163 - -
Adu08g02900 406 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 165 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu08g02900 Adu-Chr8 45467668 45470488 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu08g02900 - - gmx:100795371 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu08g02900 08 45467668 45470488 Adu08g02900 08 45467668 45470488 ECH